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Simple sequence repeat (SSR)
>UN42556
GTATCTGAACTAACTTGTCCTTTCGATGCTAAATCACTTGCCCCAGACACTTTGATTTTCCTATTGACCACAAGGAAAAAAAAAAAAAAAACCT
ACTGTGTTAGTTAATTAAAAAAGAACAAAGCAAGGCGTTTCCTTAAAAGAAATGATTCAATTCAACACCTATAAGTATCATCCACTAGTCTTGC
AACTTCCTCCTTGGGCACTGTGTTCCTTTTAGACCACAACCTCGCAGCTGTCAGTAGGAAACGAAAACGGATGTCCACGAGAAGATGACAGAAG
CGTGAATAAACAGAGAGAAAGGGTGGTTAGTTCAACTAAACTAACCTTTTCCATCAGAAAGAACGGTCAAGATCCGCTCCACAAGTTCCTGTAC
AATCAATCAATCACACATAAGTATTCAACAGTAACCCTATGAAGCTTATCTGATATCCAAAACAGTACATTACTTAAAATTTAAAACGGAAACA
GATAACACTATAATGTCTTATAGATTGAAACTCTAAACACTCATAATCTAAAACAAACAAACAAACAAACAGTCACCTGCTTCTTTCCCTGTTT
CGAAAGTCCGAGCTGAGTGAGCACATCCTTGAGTTCTTTAATCCGAAAATGTAATAGCTTATCCTGTAAACACACACACAACACGCATATATGT
ATTAAAAAGGTTCAAAACTAACACACGCATATATATC |
Primers for UN42556 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAAGATCCGCTCCACAAGTT |
60.255 |
20 |
CGAAACAGGGAAAGAAGCAG |
59.986 |
20 |
217 |
350 |
566 |
| 2 |
CAAGATCCGCTCCACAAGTT |
60.255 |
20 |
GCTCACTCAGCTCGGACTTT |
59.751 |
20 |
237 |
350 |
586 |
| 3 |
CAAGATCCGCTCCACAAGTT |
60.255 |
20 |
AGCTCGGACTTTCGAAACAG |
59.615 |
20 |
229 |
350 |
578 |
|
|
