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Simple sequence repeat (SSR)
>UN42564
AGGGGCCCCTGTTCTTCTCTCAAACATCATCAGATATTCATACAAACACGTCTCCATAGAATACAGAGAAGTGTGTTGTGGGGGTTTAGGTGTG
GAAAGAATGGAAGGAAGGAAGAAGAGCGGTTCGTCTTCTTCTCCATCGTTAACCTCTGAGCTTTTTGGTTCCAGAGATAATCCTTCTTCTTCTT
CTTCTTCTGGGTTTTTCGGATCTATTTTTGCTCCTCCTTCTCATAAGGTTATGCGACAAGAGACTGTGACTGGTGGTGGCTGGAACGATAAATC
CTCCAAGACTGGTGATGCTGACAGAAACAGAGAAGAGCAAGACAACTATGGTTCAGTTTATCATCAGGAACAAGATGATTCCGGAAGTGCTTCC
AGAGGAAATTGGTGGCAAGGGTCTCTGTATTACTAAGTAGAGTTGTTGCTACTTAAGCCAGTGTTATACTACAAAAGCAGCCAGGGTATATAGG
AAGGAAGGGAAAAAAGTAGAGTAGCAGTGGATCCGTTGGTATTAGTAAAACTTCTCTATCTTATTATTACAAAAAAAGTATGGAAGAAGTTTGT
AAGGGTTGGTTAGATGCAAAGACGCCAGGAAAGCTTGTCTGAGGGGTTTTTTTTGGTCGTGGTTTAGTAATTAACCCGACCGCTTCAGATTTAG
CTTTCGTAGTATGTATAATGGATAAAAACAATGATATGGTTTTGTAAGAAAACTACTCTAGTAAGTTTCTACATTTACAAGCATTGAAATAAAT
CACAACCTGTTGTTGT |
Primers for UN42564 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGAGAAGTGTGTTGTGGGGG |
60.002 |
20 |
AGCATCACCAGTCTTGGAGG |
60.261 |
20 |
237 |
65 |
301 |
2 |
GTTGTGGGGGTTTAGGTGTG |
60.126 |
20 |
AGCATCACCAGTCTTGGAGG |
60.261 |
20 |
227 |
75 |
301 |
3 |
TGTTGTGGGGGTTTAGGTGT |
60.126 |
20 |
AGCATCACCAGTCTTGGAGG |
60.261 |
20 |
228 |
74 |
301 |
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