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Simple sequence repeat (SSR)
>UN42594
GGGAGAGGCTCTTCCGTAGTTCCACCCGCCCTTCACGGCGGATCCGCCGTGAAGGAGCCGAGGTATAGAGGCGTCAGGAAGAGACCTTGGGGCC
GTTTCGCCGCCGAGATCCGCGACCCCTTGAAGAAATCTCGCGTCTGGCTCGGCACTTTCGACTCCGCCGTCGAAGCCGCACGCGCCTACGACGC
AGCCGCTCGCAACCTCCGCGGCTCCAAGGCCAAAACCAACTTCCCCCTCGACTGTTCCCCTTCCTCTCCTCTCCGACCGCTCAATTACCAGAAC
CAGATGGATCCGTTTATGGACCACCGGTTATACGGCGGAGGAGGAGGAGGAGGTGGTGGTGGTGGTAGTTTCCAGGAGCAGCAGGTTATCAGTC
GTCCGGCGAGCAGCAGCTTGAGCAGCACGGTGAAATCGTGCAGCGGACCGAGACCGGCGGCGAAGGCGACGAAGAGGTATCCGAGGACTCCGCC
GGTGGCGCCGGAGGATTGTCACAGCGACTGCGATTCGTCGTCGTCGGTGATCGACGACGGAGACGATATAGCGTCGTCGTCTTCGCGGCTGCGG
AAAGCGCCGTTTCTGTTTGATCTTAATTTGCCGCCGTTGGATGGTGTTGTTGACTTGTTCGCTGACGATCTCCACTGCACCGATCTACGTCTTT
GATTTTGCTTTTGCTTTTTATTACCACGATGCAAAGGAAGATGATGATGACGAGGATATAAAGAGAGAGATAGAGAGAGGTTGTGTTGAGATCT
GTTTACTGTAAGAACCAGATCTGAGTTTCATTTGTCTGTTTCTTATTTAAGATCAACCCTTTGTTACATGTAACATTTCTATAGCTGATGATGA
TGATGATGAATTGATGATTCTCAATGATTCTAAA |
Primers for UN42594 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GACTGTTCCCCTTCCTCTCC |
60.05 |
20 |
AGTCGCTGTGACAATCCTCC |
60.269 |
20 |
262 |
238 |
499 |
2 |
CCTTGAAGAAATCTCGCGTC |
59.955 |
20 |
CGGACGACTGATAACCTGCT |
60.277 |
20 |
263 |
119 |
381 |
3 |
GACTGTTCCCCTTCCTCTCC |
60.05 |
20 |
CGGACGACTGATAACCTGCT |
60.277 |
20 |
144 |
238 |
381 |
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