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Simple sequence repeat (SSR)
>UN42608
CAGGAAGACCAGACAAAGGAGAAGGAGCTGTCAGAGGATTAGCCGAATACACACTCGAACCATCTTTCTTCTCCAAGTGGTTAAACGAGCCTGA
CCTGCTACTATCACCATTCTCTGACTCTCCTGCTACCACAATCCCTTTTTCAGGTTCTCTGTGCCCAAACTTCTCACTAATGGAAGGATATCCA
TCGCCACCACCACCACCACCACCGTTGCTTGATGAAACCTCGTCGACTCTAATCTCTTTAATCTCTTCGGAGACGGTAGGAGGAAGCTGGTGGC
TAACAGGGAGTCGATTAGAAGAAGAAGAAGATCTAGAGTTTTTTCTTCTGAAAGTAAGATATACTGATATAGCCAACACTACAACGAAGATAGC
CGAGAGAACAATCACTATGACCTCCCAGAGCTCCAAACCACTGTACTTCCGAGATAATGCGTCGTTTAAACCAGATCCCATCTTCCTTATTCAC
CTGATGGGGGTAGTTTTTTGGGGATTTTCAGAGCTTCATTGAAGGAAAAAAAAGTCAGATCTCAAGCAGCATTGACTAGAAAGTTCCTTGCTTT
GGATCTTTGTAGGAATGGGATCTCTCTAACATACAGAGAAGAAAC |
Primers for UN42608 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTTTCAGGTTCTCTGTGCCC |
60.232 |
20 |
ACAGTGGTTTGGAGCTCTGG |
60.298 |
20 |
280 |
141 |
420 |
2 |
TTTTCAGGTTCTCTGTGCCC |
60.232 |
20 |
TGGAGCTCTGGGAGGTCATA |
60.758 |
20 |
271 |
141 |
411 |
3 |
GGTTCTCTGTGCCCAAACTT |
59.187 |
20 |
ACAGTGGTTTGGAGCTCTGG |
60.298 |
20 |
274 |
147 |
420 |
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