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Simple sequence repeat (SSR)
>UN42609
GGTCAAATAATGTCTGGGAGATTTATTTAACTTTACGATGTATCATGCTTCGGTATAAATCTACTTTTCTTGATTATGTAAACATTTATATGGC
TTTCCTCAGTACAGAGTCTCTTGGCTTAGGGTTTTGAAGAACAAATGTACATACAAAAACCCTTAATTTGAAAGGCTAAATGCCATCGCTTTTC
TAGTCGAAAGGGTCAAATCGTGGGTCGTGCTCACTAGCTGTGACCATCCCAGTACATAGACAAGTCGGACACATCACCTTTCCTGCGCCGGAAC
AATTTAGACACCTTTCTGTTGTCGGAGCTTGCAGAAGCCTGCTTGAAGCTCTTGTCCGTTTTATTGGATCAACGCTTAAGCACACACCACTTGC
AGAACATTTAGCGCATGGCAAGTATCCAGTCCCAAGGCAGTACTTGCACCTCTTCTTCTCTTGTTGTTTAACATTGTTAACTTCAATTAACATC
AATGTCGAAATGACACCAACGGCTCCCCCAGAAAATGATGCCACAATGGGATCTACTTGGCTTAATTGCAAGGGGAGATGCAAGCTCCTTATAA
AATCCTCGTACGAGGTTCCTCCTAATCCTACCTTGAGTTCCAGCTTAGGTGCAATGAGACCACCAAAGAAAATGATTCCAGAGATCAAAGCAAC
GCTGGTCAAGTAGAGTTGTTTCAAAGTCTTTGGTGTCACGTTGGGGAGAAAAGGAATAGAAGAAGGGATCTCAGGCATCTCTGTTGCCTCGAGC
AGAGTCTCCTCCACGCTGATGGATTTAACACTCTTGATACGCTGCTGAACGCGTAACCTCCTGACTTCCTCCATGAGGAGAAAGATCTTGTTGC
GTCTGCTCCTTATGTTGTCTTGAATCTCCTGAAGCTGCATCTGCACAAAGTCTTGAACCGTCTCTGATCCCTCGATTATACAGAAGTTATTTGG
AACAGAGTCGCCGGCGGGAGGAGGTCCGTTGTTGCTGGCGGCTGAACAGGAGAGAGTAGAGCGACCATGTAAGAGTAGACGAGGGGTGGATTTT
AGATGAGATGAAGGGAATAGGAGTGTGGATCTAGATGTCGAGGTAAGAGGAAGAGGAGGAGGAGGAGAAGAGAAGGTCGTCGTCATCATCTTCT
CGGGCTATGCTTTCGTTGTCAATACCTTTCTGGATCC |
Primers for UN42609 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGAACCGTCTCTGATCCCTC |
60.199 |
20 |
AGCATAGCCCGAGAAGATGA |
59.939 |
20 |
240 |
900 |
1139 |
2 |
GAAGCTGCATCTGCACAAAG |
59.746 |
20 |
CGAGAAGATGATGACGACGA |
59.942 |
20 |
254 |
877 |
1130 |
3 |
GAAGCTGCATCTGCACAAAG |
59.746 |
20 |
AGCATAGCCCGAGAAGATGA |
59.939 |
20 |
263 |
877 |
1139 |
|
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