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Simple sequence repeat (SSR)
>UN42613
AAACAAATCATGTGGATTATATTACTCACAAATAAAACCAATTTACACACTCTCTCTCCACTCCACCAAAAAAACCAATGAAATACAAATTTGA
AAATATAATCAGATGAGACCAGTGCTGTGGAACGGATTATTATGCTGGTTAACCGCAAAATCCCCAAACCCGCTTGTATTTGGCTGCTGATAAA
CCGGGTTAACCGGGAATTCCCCAAAATTACCAAATGGATTACTACTGTTATTGGCTCGGGGGGTTGGTGCTAATGCTAGCTGTAGTTGATGCTG
CTGCTGCTGCTGCCCATAAGTTGGCTGGTAAACACCAAAGGGGTTGTTCACAGCTGGTTGCGGAGGTGGTGGAATCCCATTGGACGTTGCAAAA
GGATCGTGAACTTCAAATGGGTTGGGAGCTGGTGCACCGTAGACAGGGCGTTGAGAGGCTATGTAGGCTCCATCATCGTATAGACTGTTCAGTG
TAAGCGTGTCTAACCCACCAGCCAATTGCCTATCGGTGGCTGCAGAGATATCGTTGCTCGGTGTTGTTACCAGCGCAAGCTCCCATCCTGTAGG
GTCGTAATCGTTTGCTTGGAAAGAACGAGGCGTTGAAGAGTTTCCATCATTTGAGATTATGGCTAAAGCAAGTGCATTTTGGTCTTCGATCGCT
GATGCATCAGGTACGGCAGTATTCAGACCCAGTAAATCATCTGTATCAATGATGTTCTGTGACTGAGTGGTAGCTAAAGTCGGAGGAGGCGGAG
GAGAATGTTCTGTCTCTTCAGATGCAAGAACCACATCATTATCTGAAGGCAACACAAGCTCACGTTCTTCATG |
Primers for UN42613 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATTTGGCTGCTGATAAACCG |
60.096 |
20 |
CCTCTCAACGCCCTGTCTAC |
59.867 |
20 |
263 |
172 |
434 |
2 |
ATTTGGCTGCTGATAAACCG |
60.096 |
20 |
CTGTGAACAACCCCTTTGGT |
59.861 |
20 |
164 |
172 |
335 |
3 |
ATTTGGCTGCTGATAAACCG |
60.096 |
20 |
AGCTGTGAACAACCCCTTTG |
60.149 |
20 |
166 |
172 |
337 |
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