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Simple sequence repeat (SSR)
>UN42636
AGATTACTCTCTCCCCTCTCTTTATTTCACTTCAGCTTCACCGTGAAGAAGACGTCATTGCCAGATCTGTACTGCCTCACTCTTAAAAACCTTC
ACATTCACGATCTGTCTGAACAGAGCTAATGAGTTCTGTCTGATCGCAAAACCTTAAAAAAAAAGAATCTTTTTTTTCTTCTTCTTTTACTGTT
GCCACCACACCAATGGCAATGCCACCTGGAAACGTTGCTCCTCCCGGAAACTGGATCCCGGACGGGAGAGACGGGTTTATCTCGTGGATTCGCG
GGGAGTTCGCTGCGGCCAACGCCATCATCGATTCCCTCTGCCAGCATCTAGTGGCGATCGGGGATCACAACGAGTACGAGGGGGTGGTCTCAGC
CATCCAACACCGTCAATCGAGCTGGTCTCAGGTTCTCTATATGCAGCATTTTTTCCCCATCGCAGATGTTTCTTACGCTCTAGACCAAGCTGCT
TGGAAGCGGCAACAGAAGATGATGATGCCTCAAAGGCATTACAACTCGGATCAGACTGTGAAATTTGGAGGAAGGAGATCATCAGGGCCTGGGT
TTAACAAGCATTATAATCATGGTGGTGGTGGTGGTGGTGGTTACAGAGGAGGTGAGACCATGGCGAGAAACGGGCATCGCTCGGATCCGGATGG
ACACAAGAGTGTAGCTAAGCTAGCGAGTTGTGATAAGGCAGTATCTGATGTCGAGGAGAAGAGAGATGGTAGCGAGAAATTGAAGAGCGATGGT
AAAGATGCGGAAGAATCTGAGTCTACTGGTGCAGGAACTCAAGTTGAAATAGTGAACCGTAGTTGTTACTCGGCGTCTAAAGATAACAATCTC |
Primers for UN42636 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGAAGGAGATCATCAGGGC |
60.563 |
20 |
CAACTTGAGTTCCTGCACCA |
59.873 |
20 |
260 |
539 |
798 |
2 |
AGGAAGGAGATCATCAGGGC |
60.563 |
20 |
TCGCTCTTCAATTTCTCGCT |
60.235 |
20 |
210 |
539 |
748 |
3 |
CGAGCTGGTCTCAGGTTCTC |
60.135 |
20 |
GTTTCTCGCCATGGTCTCAC |
60.667 |
20 |
242 |
394 |
635 |
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