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Simple sequence repeat (SSR)
>UN42643
TTTTCCCAAATAATAGAACATCATCTTACACTATACAATCCACTCGCTCTTCTCTTTTGTGCTCCAAAACCAAACATAACACTCACAAAATCTC
ACATCCCTCTCTCATCTCTCTCTCTCTCTTCTCCTATTTCTTTTAAATCCTCAAACTACCCTCGAGATCGATGGAGACAAAGCTGATCATAGCT
CTCAGTTCTTTCTTCAAATCCCAAGCCTCTGTCTCCTCTTCATCTTAAGAGGAAACCGAAGCAACAACAACGGAGCCTCTTCCTCTTACCCTCC
TCCTCCCATCACTTCATCTCGTCTCTACATCGCGAACAAAGCTAAAGAGATCCTCGCAACACGCGACGCCGCAGGAATCACCAAACTCATCACC
AACCTCTGCTACGCGAAAGAAGCAGACGAATCCTCTAACCTCCTCTACGAAACCTTCAAGAAGCATTTCCCGAATCTCCTAGCCGTCAAACTCA
TCCACGCGTACAGATTCATGACGACGACGACGGCGTTCCCCTCCTCCTCTCGCTCATGCGTTCGATCCTACTCCCTCGATCTCCCTCACCTCGC
TTCTCATCGACCTCGAAGAGTCTAACGTCGCGTTGAAAACAGAGGCGCTGAACGACATCAAAGAACATCTAAACGCTTGCCTTGCACAGCAAGA
AACCTCCGATCGCGAGTTTAAACTCCTCACGAGAATCGTATCTCGCGTCTCCGTCGATTTCTTCATCGAGTCCATCCCGTGGGACGAGCTCTCC
TCCTTCATCGTCTCTCTCGACGACAAGAAAATGCTGCTGATGTTCGGCGAGTTACCGACCGTTCTCGACGAAGATTTCTTGAAGCCGTTGCTGG
AGAATGATCTCGGTTTCAAGATCGTTAAAGGCTTGCTTGA |
Primers for UN42643 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGTGCTCCAAAACCAAACA |
60.127 |
20 |
ATGGGAGGAGGAGGGTAAGA |
59.89 |
20 |
235 |
57 |
291 |
| 2 |
TTGTGCTCCAAAACCAAACA |
60.127 |
20 |
GATGGGAGGAGGAGGGTAAG |
59.89 |
20 |
236 |
57 |
292 |
| 3 |
TTGTGCTCCAAAACCAAACA |
60.127 |
20 |
TTGTTGCTTCGGTTTCCTCT |
59.853 |
20 |
199 |
57 |
255 |
|
|
