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Simple sequence repeat (SSR)
>UN42644
GGAGAAAGAGAAATTTCTCTCTTGTTCCCTCATTTCTATCTTTCACAAGAGAGAATTTTTCTAGAGAGGAAGAGACTATCTTTTGATGTAATAT
AGCCTTCACTTTAGGCGAATTTCAGTTTCGCGCTGGCGAATTTTCTTTTCGTTTAGACGAGTTTTTGTTGTGTGTTTCCAAACTGAATCAAAGT
TGTTCTTCTTCTTCTTCTTCATCTTCTATCTCTGGTTCGGTTTGAATATAATAAAGTTCCGATTTTGTTTAATCGGATTTTAGTTTTCTAATGC
TCCTATGTGCTCTTTTAAATCCCAATGATGTTGAAATCAAACGTTTTTGCTGGTTATGCCTTTCTTCTTCTAAACAAGCATAAATCTTGCTCTT
GCTTATAGCGGCTGTTGATATGGCCATAGAGCTAAGTAGCTTGTAGGAAGTTTGAATGGATTGTTGATTTTACTTCGATATAGTTGGGTTTGGT
TTAAGTAAAGTTGGAGTTTTTCCAGTGAAAAGCGTCCTAACAAAGACCTTAACTTAAATTGTATTGAAGTCAACTCGTGTTTTAATGTTCCCAG
CAATCTCATATTTGATCTTTGATATCTTTGGTTGAAAAGAGGAGCAACTGTTATGTTACACGAAGCTGATGGAATT |
Primers for UN42644 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGCGAATTTTCTTTTCGTT |
59.699 |
20 |
AGCCGCTATAAGCAAGAGCA |
60.272 |
20 |
262 |
128 |
389 |
| 2 |
TGGCGAATTTTCTTTTCGTT |
59.699 |
20 |
CAGCCGCTATAAGCAAGAGC |
60.272 |
20 |
263 |
128 |
390 |
| 3 |
TGGCGAATTTTCTTTTCGTT |
59.699 |
20 |
TCAACAGCCGCTATAAGCAA |
59.608 |
20 |
267 |
128 |
394 |
|
|
