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Simple sequence repeat (SSR)
>UN03868
GGGCCCAAAACCCTAGCAACGGAACCGAAAGTGGAGATAGCTAAGGAGGAGAAGGTCAAAGAGACTGATGGTGAGATCGAAGACGGAGTGAAAG
AGAAAGAGAAAAAGAAGAAGAAGAAGACCAAGTCGAAAGCTGCCGAGTCTGAGACTTTGGGTGATGAGGAGAGAGTTTCCAAGAAGAGAAAAAG
ATCAGAGCCTGAAGAAGAGACAAAAGAACAGACAGATGATGATGATGAGGACTCTAAACGTAGGAAGAAGGAAGATATGGATGTTCAAGAAACA
CCTGTTAAGCAAACTGATGTTGAGGAGAACGGTAACGTTGAAACAAAATCAACTAATAAGAAGTCTGGAAAGGGGCTTTCTGACTCTAAAGAGC
CGAAGAAACCGTTTCAGAGAGTGAACGTTGAGGAAGTTGTGTTCACTGACGATAGGCTTAAAGACAACTCTTATTGGGCCAAGGGTGGTGCTGA
TTCGGGCTATGGTGCTAAAGCTCAAGAGGTTCTAGGGCAAGTCAGAGGAAGGGGTTTCCGACATGAGAAGACGAAGAAGAAAAGAGGAAGCTAC
AGAGGAGGAGAGATTGATCTTCAATCACATTCAGTTAAGTTTGAGTACTCAGACGATGAATGATGATCATTTATCAACACTTTCTTATTCTCAC
TGTTTCCTTTGCTTCTCTTTTTGATTCTCATTTTGTTTTGCTTATTTCAATATGTAAAACTATTCATGTTTTGTCTGTGTTAATGTTCCCATCT
GGAACTTGCGGGAAGAAGATTCTGTTTCAGTTCAAAAA |
Primers for UN03868 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGGAACCGAAAGTGGAGATA |
60.066 |
20 |
GTCTCAGACTCGGCAGCTTT |
59.751 |
20 |
130 |
20 |
149 |
2 |
AAAACCCTAGCAACGGAACC |
60.352 |
20 |
GTCTCAGACTCGGCAGCTTT |
59.751 |
20 |
143 |
7 |
149 |
3 |
CAAAACCCTAGCAACGGAAC |
59.609 |
20 |
GTCTCAGACTCGGCAGCTTT |
59.751 |
20 |
144 |
6 |
149 |
|
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