Simple sequence repeat (SSR)
>UN42678
CACAAATAATTTTTTTTTCCTCTTCCTCATTCATCTTCGTGATTTTTTTCTTCTGATTTAATGTTTTTTTGTTTCTTCTCTTCTACTCATCTGT
TTTTAGATTTGTTTTTTTTTGTTTCCAGATTTGCGAAAATGGTACTGTGATAACTGAAGGTGGTGGTGTGACGACCGAGAGAGCAAGACAACAG
AGGACATGGCTGAGGGCGTGGCTCGTCGCTGCATCTCTCTCTCTCTCTGTTCGTTTTAGATTGTTGGAGGCTGGAGTAAGAGAACGAACAGAGG
GTTGAGGTGTATGCTCTGGAGGCTGGAGGCGGAGGACTAGGGTTACGGAGCTGGAGGCGGAGGATTAGGGTTACAGAACTAGAGGCGGAAGCTC
GGGGAATGGTGGTTTAGGTCTAGGTTAATTGGGTTTTGGTTTAATGTTTGTAATTTATTTTTTCTTTAATGTGTTCTTTAGTTATTTTGTATGA
TGATTAAAATTAATAAAATAAATTTTAATTTTTAATT |
Primers for UN42678 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GACGACCGAGAGAGCAAGAC |
60.143 |
20 |
CTCCAGCCTCCAGAGCATAC |
59.973 |
20 |
147 |
164 |
310 |
| 2 |
AACAGAGGACATGGCTGAGG |
60.261 |
20 |
CTCCAGCCTCCAGAGCATAC |
59.973 |
20 |
127 |
184 |
310 |
| 3 |
GACGACCGAGAGAGCAAGAC |
60.143 |
20 |
CACCTCAACCCTCTGTTCGT |
60.151 |
20 |
128 |
164 |
291 |
|
|
