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Simple sequence repeat (SSR)
>UN03884
CGTAACTTCTCCACTATTCGAAATTACATATACAGTTTCTGATGACGTCGCCAGCGATTGATCAAGAGAACGTTGCTCCTATGGAGGGAGTCAA
CACGTCGGTGAGCGAGAAGAAGAAACCTGCAGCGAAGGGAGGCAAGACGAAGAGAGCTAAGGAAGTGAAGGTGAAGGAGAAGAAGAAGACTGTG
AAGAAAGCTGTCTCAACTCATCCTACTTACGAAGAGATGATCAAAGATGCGATCGTTACGCTGAAGGAGAGAACCGGATCGAGCCAATACGCGA
TTCAGAAGTTCATCGAGGAGAAGCATAAGGTGCTCTCGCCTTCGTTCAGGAAGCTGCTGCTTCTCAATCTGAAGAGACTCGTCGCTTCCGAGAA
GCTTGTCAAGGTCAAGGCCTCGTTTAAGATTCCGTCGGCTAAACCATCATCATCCCCCAAAGCGGCGGCTGCTACATCTGCTCCGGTGAAGAAG
AAGAAGAAACCTACCACTGCCGCGGCGACTTCCAAGCCGAAGGGGAAGAAGGTAACCGCAGCTTCCAAATCCAAGGGAGCTAAGGTGTCTAAGA
AACCAACTGCTCGTAAGGCCACTGTTGCGCTCACGAATAAAGCTGTTAAGGCTGAGCAGAGACCAGCCAAGGCAGCGAAAACATCATCGAAGGT
TACATCTCCGGGGAAAAAGGCTCTTCCTTCTAAGAAGAGTGTGAAGCCAAAGACGGTGAAGTCTCCAGTGAAGAGGGCTTCAAGGATGGCCAAG
AAGTGAAATTAGGGCTTAGTGTTGACGATCTTGGTAGTAGCTTACTCTCTAGGCGTTAATCTTGTATATCTTTTCTTTATCTCTATTTAAAGTT
CTCGTGGTTTCATATATAAATAGCTAAATCCTTTTC |
Primers for UN03884 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CATAAGGTGCTCTCGCCTTC |
59.978 |
20 |
CGGTTACCTTCTTCCCCTTC |
59.934 |
20 |
223 |
306 |
528 |
2 |
CATAAGGTGCTCTCGCCTTC |
59.978 |
20 |
GTTACCTTCTTCCCCTTCGG |
59.934 |
20 |
221 |
306 |
526 |
3 |
CGAGGAGAAGCATAAGGTGC |
59.978 |
20 |
GTTACCTTCTTCCCCTTCGG |
59.934 |
20 |
231 |
296 |
526 |
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