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Simple sequence repeat (SSR)
>UN42707
TCAGAATTCATAATCTTAAATCCTAATCCTCTGTTCCGGAAGCTCCCTGTTCTGCTATTCTGTGTTCGTTGGATGAGGAGCAGAAGAAAGTGAA
AGTTGTAAAATATATAAAAGTTTCATGGGCAATTCATGTCGTGGTTCTTTCAAGGACAGAGTCTACGAGGGGAATAACACTCGTCCCGAGGAGA
ATTCAAGAACCACCACCACCACCAACGTTTCCTCCGATCATTCTCCGGCCGCAGAACCACAAGACTTCTCCAAAGAAGATTCCAAAAAGGACAA
TAACAACTATCCAGTTCCTGTAAAAGAACCTTTTGTACGGCGCAACATGGACAACCAAGCTCACTACGTTCTCGGCCACAAGACTCCCAACATC
CGCGATCTATACACCTTGAGCCGCAAGTTAGGGCAAGGACAGTTCGGGACGACGTATCTTTGCACCGAGATCGCCACAGGCGTTGACTACGCTT
GCAAATCTATATCCAAGAGGAAACTCATATCCAAGGAAGATGTTGAGGATGTTAGGAGGGAGATTCAGATAATGCACCATTTGGCGGGTCACAA
GAACATTGTTACGATCAAAGGAGCTTACGAGGACCCTTTGTACGTTCACATTGTCATGGAGGTTTGTGCTGGTGGTGAGCTGTTCGATAGGATT
ATCCAGAGAGGGCATTACAGCGAGAGGAAAGCCGCTGAGTTGACCAAGATCATTGTCGGTGTTGTTGAGGCATGTCATTCTCTTGGTGTCATGC
ATAGAGACTTGAAGCCTGAGAATTTCTTGTTGGTTAATAAGGATGATGATTTCTCTCTCAAGGCCATTGATTTTGGTCTCTCTGTTTTCTTCAA
ACCAGGCCAAGTATTCAAGGATGTTGT |
Primers for UN42707 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGGGAATAACACTCGTCCC |
60.19 |
20 |
ATACGTCGTCCCGAACTGTC |
59.997 |
20 |
272 |
162 |
433 |
2 |
AGGGGAATAACACTCGTCCC |
60.19 |
20 |
GATACGTCGTCCCGAACTGT |
59.997 |
20 |
273 |
162 |
434 |
3 |
AGGGGAATAACACTCGTCCC |
60.19 |
20 |
CTGTCCTTGCCCTAACTTGC |
59.875 |
20 |
257 |
162 |
418 |
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