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Simple sequence repeat (SSR)
>UN42721
TGTATCTCTTCCTTCTCTTCTTCTTTCACGATATCTCTCTCTCTCTCTTTTTTCTTGGTTTCGGATCTAAAACTAGTCTCTTCTAATTCTTCTT
TAATCCTTTGAATCTCTATCTTCTTCAATCATCACCACAAACACACGACCTCCCCACCGTCCCAGCATCACAACGACCACCACATGGCCTCCAT
TCGTTCTCTGTCCCAACACCACCACCAACACCACACATGACCTCCGTTCGTTCGCCGTCCCAGCATCACCACCACCACCACACCTCCATGGAAT
GGAGGAGGCAAGGCGAAGAAGCTGTTGTGTGGAGATGGCAGAGGAAGCTCGTGGTGGAGGTGGAGGTGGATCCGGGAAAGAAGAAGAGAGACAG
AGACGCGAGGAGGAGGCGAAGACGAATGGAGGAGGAGGAAGATGACGGGATGTACAGGGCGGCGAGATGGTGGTCCGCCAGTGAGGATTGCAAG
ATGAAGAAGACGATGAAGATGGTGGTGGAGCGGCGGCTGCATAGGTTTAGTTAGTCATCAATTAGGTTTAAACTTGGTTTAGTTGTAAGCATGG
TTTAAGTTATTGGTTTATTTGGTTTAGTCTTTTTTCATTTAATTAGAGTTTTTATATTTTTGTAAACCAATTTAATTATAAATTATTTTATATA
ATAAAAAATTAAATATCTAAACG |
Primers for UN42721 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCACCACAAACACACGACCT |
60.047 |
20 |
TCCACACAACAGCTTCTTCG |
60.025 |
20 |
190 |
126 |
315 |
2 |
CACCACAAACACACGACCTC |
60.047 |
20 |
TCCACACAACAGCTTCTTCG |
60.025 |
20 |
189 |
127 |
315 |
3 |
TCACCACAAACACACGACCT |
60.047 |
20 |
ACACAACAGCTTCTTCGCCT |
60.058 |
20 |
187 |
126 |
312 |
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