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Simple sequence repeat (SSR)
>UN42805
TTTTTTTTTCCTTGGAAAACTGAGAGAGAAACGAAACACACAAGAACAGGTGAGTAAGTAAAACGAGTGATGACCGATGATCTACATGATTACA
CAAGAACATGCCCTTTGTCTTCCCCTCTCCCATTCTTCATCTGATAATCCCATCTCACTGGGCTCAAATTCTCGAACTTGAGTGAGTTCACTAC
CACAAGCATCTGGCCACTTCACTTTCCGCTTTCCCAAATCCTCGTCACCACCAGTGAGGCCGCTAGCATCGTCATGGACGGTCAACGTCTCCTC
GTCTTCTTTGATATCCTCAAGAGTGCGTGACTCCACAACCGACGGCGGCCTCTTCAAGCTGCTCCTCAACGAGAGTTTGAAAGCTTCTTTGCTG
CTGTTGTTATCATCATCATCATCAGCAGCTTTATCTTTGTCCTTCTCAGGAAGAGCAACAACATCAGCTTTATTTGCTGCGCCGTGGTCTCTGT
CCTTCTCAGGAACAGCAACAGACTCTGGTGGTGGTAATGAAGATACAACGGGAGGATGCTGCAGAGGTTCTACTTTAAGAGGACATGGGGTGGT
GGTATCAAGTCCCGCGGAAGCGCCACCGCCGCAGCCACAAGAAAAACAAGAAAAGGAAGCGCAACCGCGGGAAACACGGTTCTTGATGGAATCC
AGCTGAAGAAGAAGAGGGTCAGGGTAATGATGATGATTGAAAAGGACAACTCTCATGGGGGTTTTTTTATCACCGGAGC |
Primers for UN42805 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCAAGAGTGCGTGACTCCAC |
60.03 |
20 |
GAGAAGGACAGAGACCACGG |
59.835 |
20 |
179 |
299 |
477 |
2 |
TCAAGAGTGCGTGACTCCAC |
60.03 |
20 |
CCACCCCATGTCCTCTTAAA |
59.784 |
20 |
265 |
299 |
563 |
3 |
CACTTCACTTTCCGCTTTCC |
59.853 |
20 |
GAGAAGGACAGAGACCACGG |
59.835 |
20 |
275 |
203 |
477 |
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