Simple sequence repeat (SSR)
>UN42845
CAATAAAATCACTATCCGGTATAGATTTCCGATCCCTCGCCTCGACGACCTCCTGGACCAAATAGGCCGCGCTTCTATATTCACTAAGTTGGAT
CTAAAAAGTGGATATCATCAGATTCGCATTCGTCCTGGTGATGAATGGAAAACGGCGTTTAAAACGCGTGAGGGTCTCTTTGAGTGGTTGGTAA
TGCCTTTTGGCCTCTCCAATGCTCCTAGCACGTTTATGCGAGTGATGAATCAGGCTCTTAGGCCTTTTATTGGCAAGTTTGTGGTCGTCTACTT
CGATGATATCCTCATCTTCAGTATGGACTTGCAAAGTCATCTGGAACATCTAACCGACGTTCTTCTAGTGCCGCCGATGCTGTGGACGATGATG
ATGAGAACATCCACCGTCGCGAATGATTTTAAAGCAGTGATCCGGTTTCGTTTTTTTGTGTTCACAATACAAAATATAATAAATAAATGAATAC
ATATACACACACACACACAAAAAGATGTGGTGTGATAAACTAGTAATCAAGTTTCTGAAATATTTGCAGACTAATGTTGTCAATTTTTGGCATA
TAT |
Primers for UN42845 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGTGATCCGGTTTCGTTTT |
59.971 |
20 |
TGCCAAAAATTGACAACATTAGT |
58.601 |
23 |
152 |
411 |
562 |
| 2 |
CAGTGATCCGGTTTCGTTTT |
59.971 |
20 |
ATGCCAAAAATTGACAACATTA |
57.148 |
22 |
153 |
411 |
563 |
| 3 |
TGATGAGAACATCCACCGTC |
59.478 |
20 |
TGCCAAAAATTGACAACATTAGT |
58.601 |
23 |
188 |
375 |
562 |
|
|
