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Simple sequence repeat (SSR)
>UN42846
GGGATAGACGTCCGAGTGATCAAGATATCCTCTCCGATTGTCGATTGATTGTCTCTCTATCTTCCTACGAAGAAGCCAAGCCAAAAGGATAAAA
AGAGGGGATGGAATCGAGCAGAGGAGGAGGTCAAGGTGGGATCCAGCAGTTGCTTGCTGCTGAACAGGAAGCTCAACACATTGTCAATGCTGCC
AGGACCGCAAAGATGGCAAGGCTGAAGCAAGCCAAAGAAGAGGCTGAGAAGGAGATTGCCGAATACAAGGCTAAGACAGAGCAAGACTTCCAGA
TGAAACTTGAGGAGACAAGTGGAGACTCGGGTGCGAATGTGAAGAGGCTGGAGCAAGAGACTGATGCCAAAATCGAACAGCTCAAAAGCGAAGC
TTCCAGGATTTCCAATCATGTTGTCGAGATGCTCCTCAAACATGTCACCACTGTCAACAACTGAGTCTCAATCTCCAGGATTTAATTTTTTTTT
TTTTCTGCTTTCTTCTTTTTTTTTTTGTAATTTCTCTCCAGTACTACTCTCTTGTTGTTGTTGTTGTTGTTAATATTCATATCTTGTTGTTCTT
GTTGGTCGATGAGAGGCTTGAGATGTAAGTAAACACACGAAACAATAATGTTGAGTCTTTTGCATTTGT |
Primers for UN42846 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCTTCCAGGATTTCCAATCA |
60.014 |
20 |
TCTCAAGCCTCTCATCGACC |
60.497 |
20 |
213 |
375 |
587 |
2 |
TCATGTTGTCGAGATGCTCC |
59.794 |
20 |
TCTCAAGCCTCTCATCGACC |
60.497 |
20 |
196 |
392 |
587 |
3 |
ATGCCAAAATCGAACAGCTC |
60.221 |
20 |
TCTCAAGCCTCTCATCGACC |
60.497 |
20 |
242 |
346 |
587 |
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