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Simple sequence repeat (SSR)
>UN42875
GGGAGGCGATTTGGGAGATAGAAGCAAAGTAAAGAGCAGAGGGAAGTTATGTCGGGAGGAATAGCACGTGGTCGACTCACAGAGGAACGGAAAG
CGTGGCGTAAGAACCATCCTCATGCTTTTGTTGCCAAGCCGGAGACTTGTTCAGATGGAACAAATAACCTAATGATCTGGCAGTGCATCATCCC
TGGCAAATCTGGGACTGATTGGGAAGGTGGGTTTTATCCACTGACACTCAATTTCTCGGAGGACTACCCAAGCAAACCTCCAAAGTGCAAGTTT
CCTCAAGGCTTCTTTCATCCTAATGTCTATCCTTCTGGAACTGTTTGCCTCTCTATTCTCAATGAAGATTATGGATGGAGACCAGCCATCACTG
TGAAGCAAATCTTGGTTGGTATTCAAGACTTGCTCGATGAACCAAACCCGAATGACCCTGCACAGACTGAAGGATACCAGCTCTTTGTCCAGGA
TAAGAATGAATACAAGAGAAGGGTGAAACAACAGGGGAAACAGTACCCACCAACTCTTTGATATCTTGCCTTGTCTCAAGTCACGGATAAATTT
GTTTCTTTGAATGATTCTCTCTCTCTCTCTACTTTGTAAGAGCTATTGAGAGGACACTTTCACATCTTCAGTAATAAAAAATTACATTTTCATG
AAGACAGATAAATGGTTGTTGCTTACGCAATCTAACAATAGTCATGACTGGTTTCGTTGATGTAAAACTTACTACACACCCTTTGAACATTATT
CTT |
Primers for UN42875 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGACCCTGCACAGACTGAAG |
60.022 |
20 |
GATTGCGTAAGCAACAACCA |
59.735 |
20 |
262 |
429 |
690 |
2 |
CCCTGCACAGACTGAAGGAT |
60.261 |
20 |
GATTGCGTAAGCAACAACCA |
59.735 |
20 |
259 |
432 |
690 |
3 |
ATGAACCAAACCCGAATGAC |
59.653 |
20 |
GATTGCGTAAGCAACAACCA |
59.735 |
20 |
278 |
413 |
690 |
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