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Simple sequence repeat (SSR)
>UN42907
CAAAATTATAATTTATAAATTAGATTGAATTACAAATGGTTTACATGGAAAAAAATAAACCAAATAAACCAACTAAACCAAAAACCTAAACCAG
AAAACTAAACCTAATTACTAAACTACCATATTCTTCGTCTTCTTCATCTTCTACTCAGCCGCCACACCACCACCCATTTCTGTGTCCATCCCGT
CGTCCTCATCCACCATTCATCGCTGTCCTCCTCCTTCCAGTCACCGTCGCGTCCTCCTCCACCATTCATCTCTTATCTCCGCCTCTCTTCTTCT
TCTTCTTGCTCAGCTCCACCCTCGCTTTTGTCTTCTCTCTTTCTCTGCATCTCTTCTTCTCCGGTTCCACCTCCACTACCACTGCTAACTTCCG
GTTACAGCACAGATTCTCCAGATTCGCCACAAGCACCAAGATCTGTTTCTCTGTTACAAAATCTCAAAAAAATACTAACAGGAAGCTACGACAT
AGAGAGAGAGAGAGAGATCGTAGAAGGGGGATGAGGAGATGAGTTGAATAAAAAAAATCTTACATGAAGCTACGACATAGAGAGAGAGAGAGAG
ATCGTAGAAGGGAGATGAGGAGATGAGTTGAATAAAAAAAAAATCTTACAGGAAGCTACGACAGAGAGAGATCGTAGAAGGGAGATGAGGAGAT
GAGAAGATGAGTTGAATAAAAA |
Primers for UN42907 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACACCACCACCCATTTCTGT |
60.135 |
20 |
TGGAACCGGAGAAGAAGAGA |
59.92 |
20 |
194 |
158 |
351 |
| 2 |
ACCACCACCCATTTCTGTGT |
60.135 |
20 |
TGGAACCGGAGAAGAAGAGA |
59.92 |
20 |
192 |
160 |
351 |
| 3 |
ACACCACCACCCATTTCTGT |
60.135 |
20 |
CCGGAGAAGAAGAGATGCAG |
60.088 |
20 |
189 |
158 |
346 |
|
|
