Simple sequence repeat (SSR)
>UN42915
GGAAACGGGAGGAAGGAGACTGGACTCTGATGGGAAGTCCATAACTGAAAAGAAAAAATAATAGAAAATAAAAATAACGGAAGAGAGGAAAAAA
TAATAAAATCTGGCAGCAGCCTCTGTTGATTAATCGAATTGATCGCGTTCCTCCTCCGCCTCGCCGTGGTGCTCATTCATTCATCACCGTTATC
TGAAAGGAATGGGTGGAACAAGCAAGAAGGGGAAGAACAATGGCGGGAGAAGAAACAGGAGGAAGAACAATGCTCAGTCAGGTGCTCACGAGAC
GTCGACTTCTTCAAACAACTATGGAGTCCCCACTTCATAGTCTTTTTGAAGACCATCTTTTTTTTTGCTAACTCATCTCCACATTTGTCGACTA
GTCACACAGAAGAGGACTTGTTCTGGTCTTCTCAACTCAAAGCGTTGTCGTTTGTAAACTACCCTTCTCGTTGGTTCTCTCGGAGTTTTTATTT
CTCTCTCTCTCTCTCTACTCTGTGATTGAATTGTTCTCCTAAGCAAGAGTCTTTAACAGCATCTAGAGATTGATGAATTCAACGAATACTTGTC
CT |
Primers for UN42915 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTCAACTCAAAGCGTTGTCG |
59.634 |
20 |
TGCTTAGGAGAACAATTCAATCA |
58.888 |
23 |
109 |
407 |
515 |
| 2 |
CTCAACTCAAAGCGTTGTCG |
59.634 |
20 |
TTGCTTAGGAGAACAATTCAATCA |
60.128 |
24 |
110 |
407 |
516 |
| 3 |
AATGCTCAGTCAGGTGCTCA |
59.577 |
20 |
TGCTTAGGAGAACAATTCAATCA |
58.888 |
23 |
259 |
257 |
515 |
|
|
