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Simple sequence repeat (SSR)
>UN42949
GGATATCCAAACATATCTCATCCCCCTTCGAGACTTCTTCCTTCTTCTTCTTCTTCGTATCCGATCGCAACTTCGTCTTTTCTCAGCAAATCCA
ATGGATTACGACTTCAGGAACAAATCTGGCCCCTCCTACGGCCGCCCTACGTACCCATCTCCTTCTCCATCATCTATGTACACCGGTCCTCCCG
GATACCCAAAGATCGGCGGCGGCCAACCGTTTTTCTCTCCGCCGCCGGAGAGAACCCCGTCGTTTCAACACAACCCTTCTTCATCTGGATTAGG
AATCAAGGTGACTCTCAAGCCTGACTATCGTATCACTCCTCCGCCTCCGTTGTTGCCTCGAGTTGGAGATGTTCCTCGCAGCAGCTTTCAGTTC
GATTTCGGACTAGAAAGGAAGGTTCTTGCTGAGGCGGAGAAGGAGAACCCGGATTGGAGCAAGTTTGGGTCCGACCATCCTCCTCCTCCTCCTC
AACCGGCGAACTTTTCGCAACCACCGCCGGCTAACTTTGCACAACCACTACCGGAACATTCAATGGGTGTGGATCCTGTAGTGATGAAATATGC
TGGGCTAAACCGAGAGGCTGTCAACATCTCTGTTGCAAACTATGGTGATAATCCCACAAAGGTTCATGAATTTGCAAATGGGTTCAGTGCGATA
AGGGAGATGGGGTTCCCAACGAACGCTGTTGCAGATGCTCTCTTCATGTTTGAGAACGACACTGAGAAGGCATTGTCACATTTGCTCCATGGTT
CTTCTTGAACTTTTTTTTAGACTTTCAAATTATCCTTCTATTAGTGTGTATAAGTAAAACATCGAATAACATAAAAGATTGACAAAAGTATTAG
ACATTGTTTTTTCTTTTACTTTGTGTAAATGGATGTGATTGTTTTGGGG |
Primers for UN42949 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCTCATCCCCCTTCGAGAC |
60.421 |
20 |
TGGAGAAGGAGATGGGTACG |
60.065 |
20 |
149 |
15 |
163 |
| 2 |
CTCATCCCCCTTCGAGACTT |
60.586 |
20 |
TGGAGAAGGAGATGGGTACG |
60.065 |
20 |
147 |
17 |
163 |
| 3 |
TATCTCATCCCCCTTCGAGA |
59.581 |
20 |
GTAGGAGGGGCCAGATTTGT |
60.328 |
20 |
120 |
14 |
133 |
|
|
