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Simple sequence repeat (SSR)
>UN42980
GGATAATAAGCAGCTATACTCTCTCTGCCTAAATCTTTTCCTTTTATATCCGTTGTCTTTCTCTCTCTCTCTATATTATATATAAATAGAAACC
ATGGGAATAGCAGAAGAAAGCAGCAAGCCAATGTGGGGGAGCATCAGCCACGCTTCTCCAGGCCACGCTCTCAGTGGCAAAATCATGATTTCCT
CCGTCATCATCCTCTCCGTCGCCCTTACTATGATCATCTGCTTCCACAGCTACGCCAGATGGCTATTCCGTCGTCAGAACCGTCGCATTCGCCG
CCGGATTCGTGCTCACATCCTTTCTCTCTCCTCCTCCTCTCTCACCCCTCTCGATCCAGCGGTGCTCGAGAAGATTCCGATCTTCGTTTACTCC
TCGGAGACTACTCATCAATCGCCACTGGAGGAGTGTTCCGTTTGCTTGTCGGAGTTCGAGGAAGATGACAAAGGCCGTCTCCTCCCGAAATGTG
GCCACGCTTTTCACGTAGATTGCATCGATACTTGGTTCCGTTCCAGTTCCACTTGCCCTCTTTGCAGAGCTCCGGTTCAACCAGAATATCTGTC
GACACTACCCGAACAAGCCGCTCCGGTTAAACCGGTCGAGGACATTGAAACCGGAAGTTCTTCTTCCTCCTCCTCTTCTTCTTCTTCTTCTTCT
TCGCCGTTGAGGTTTCCTCTGGAGGCGTGCGAGAGAGAACCGATAGATTTGGTTGGTCTCACGGTGGAGATTCCCGCAGAATTTGAAGGCTCTG
TTAACCCGGTTTTATCATTGAAAAGGTTATGGAGCATCTAAACCGGATGTGGCTTGTGGGCCAAGCAAGCAAACTCAAAAATGGTTTGTATTTT
TGCCAAACCGCATTAACTTTCAGCAGGCCACCAGTGCCGGCCTACGCGGGCGTCATTCCTGGACCCCGAGAGCGTCTTCTTTACATAGTGCTAC
TGGCCTAAGAAGAGCTTTTCATTACATTAAAGTTTCATTTGTTAAGTGTATTTATTTAGCATTGTCTCTTGAAAGTTGAAACCAGTTGATTATA
AATTCCAAAAAGATGACTCGGTTGTGAATATTGCAGCTAAAGTAGAAGTAGTAATTTATTAAGACAAATCGTAATCATTGTTGGAATGGGAATC
AGATACCACTAAATAAAACTGACCCGATTCCAC |
Primers for UN42980 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGCAGCTATACTCTCTCTGCC |
57.2 |
22 |
GAGGATGATGACGGAGGAAA |
60.011 |
20 |
195 |
8 |
202 |
2 |
AAGCAGCTATACTCTCTCTGCC |
57.2 |
22 |
ACATTGGCTTGCTGCTTTCT |
60.022 |
20 |
121 |
8 |
128 |
3 |
AAGCAGCTATACTCTCTCTGCC |
57.2 |
22 |
GCTTGCTGCTTTCTTCTGCT |
60.044 |
20 |
115 |
8 |
122 |
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