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Simple sequence repeat (SSR)
>UN43034
AAGGAAGACATCTCGGAGCTTACCAAGACCTTGAGAAGCCAATTCTGAGGCGTAGCTTCGTTCCTCTCGCAACCGTCACCATCTCCGAATCTCC
AGAGGGAGAGTCCAGATCATGAGGAGGAGGGGAGGACGAGGATCTGATCGCCGGGATTAGGAACGATTTCGCGGAGATCGGAGGGAGGTTCAGG
ACTGGGATTTCGAAGCTCTCCGAGAACTTAGCGTCGAATTTCTTACAGCTGGGCTCAGAAGGAGTGGATCCGAAGGGTTACGATGACGTAATCG
GAGTGACCGAGGAGGTAGTTGCGTTCGTGAGGGATCTCGCGATGAATCCCGATACTTGGTTGGATCTTCCTTTACCTGATGATGATGATGATGA
TGATTGGTTGAACGATGAAGAGAGTTCAGATGCTGTGAGCGGCATGGAAGGAGGAGTAACTACTAAGCATCCTCTTGGTGAAGACGAAGAAGAT
GTGTCATTCAGTGATCTAGAAGAAGATGATGATGACGAGGTAAGAGACGTACCCGTGAGTTCCAAGAGATCTACTAACTCTAGTTCGCCAGACT
GGGTACAGATATAAGACGGCAACGCGGGTCAGGCAAAAAGAGAACAACAGAATCAAACCATTGTCTTGATGTCGATGAAATGTAATACAAATGA
CCACCTCTAGTGTTCTTTTGGTTATATAAACATAAAATCTCTCAAGTCC |
Primers for UN43034 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGGAGGTAGTTGCGTTCGTG |
60.312 |
20 |
CCCAGTCTGGCGAACTAGAG |
60.005 |
20 |
276 |
292 |
567 |
| 2 |
AGGTAGTTGCGTTCGTGAGG |
60.312 |
20 |
CCCAGTCTGGCGAACTAGAG |
60.005 |
20 |
273 |
295 |
567 |
| 3 |
GTAATCGGAGTGACCGAGGA |
60.073 |
20 |
CGCTCACAGCATCTGAACTC |
59.733 |
20 |
142 |
276 |
417 |
|
|
