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Simple sequence repeat (SSR)
>UN43116
GGGGGAGAAGCCTGCAGAGAGAGAGCCGGAGAAGACCACAACAAACAAACAAAAAGTTACGAAGAAGAAGAAGAAGATGATCTACCGAAAGTGG
AGTCTGCTTTCCGGTCCACCGGTTATACTCGGAGGAGCCGTAGTTGCCGCCATCGCGGTCGGCATCCTCGTACAGAACGTAATTTGCTTCTTCG
TCTCTTAATTGAATCGTTAGATCTATAGAATCTTGATTTTGGCTGATTTGTTCCTTATTTAATTTTTCTTATTCGCAAATTTTGCATGTTTTGC
GCTTCTCCTTTGATCTTATTCGAATCGCAAATACATTTGATTAGTTAGTAATTGACCCTTTTGAGATTTGCTTGAACGTCCTTTTGACTGAAAT
TTTGTGTTCTGCCTAGATTTAGTTGGTGGATCAATGATCCCTTTCCCCTTTACTTGTAAGAATGCCATTTCAAGCTTTTTTTTTTATCTTCGGG
AGATTATGTTTATGACATACTATTTATCTCTTCGTATCTTATTGATCCAAATGTTTAATTTGGAGTCTGATTTTGTTTTATATACCTCATGATT
AGGTTACGAAAGGGGAACAAAAGAAGAATGTCTCATCAAACAAGTGAAATAAGGAAAAGATTGGGGAGAAGATGCTACTAATAAACTTTGTAGT
GTGATTTTAGTTCCTGCAGTGTAACCTCTCAATAATGCTTTTGGAAGCTTTTTCGAATACACAGATCCTTTTTGATGTTTTGGACTCTTATTGC
CAATAATAATTTCTCACTTTTTTGCG |
Primers for UN43116 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGAGAGAGCCGGAGAAGACC |
60.096 |
20 |
ATCAAAGGAGAAGCGCAAAA |
59.96 |
20 |
279 |
18 |
296 |
2 |
AGAGAGAGCCGGAGAAGACC |
60.096 |
20 |
CTCCGAGTATAACCGGTGGA |
59.948 |
20 |
111 |
18 |
128 |
3 |
AGAGAGAGCCGGAGAAGACC |
60.096 |
20 |
ACGTTCTGTACGAGGATGCC |
60.142 |
20 |
157 |
18 |
174 |
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