 |
Simple sequence repeat (SSR)
>UN03945
CGAAATATAAATGTCGTATTACTGTATAAAAGAAGTATTGCAAAGTTTCTCTTGTGTAGCCTCAAGGACCATTATCTACCACTACTAACTACAA
CTACTACATTTTCACAGACAAAAGAACATAAGATAAGAGTTCAAAGATCATATAAACACCAAGAACTCATCATCTTTTGGAGACAACCACTAAT
ATCAACATCGACATTGACACAACGATCTTGAACCCTGAAGTATCCCAAAAGTTCTGCTTCTCTCCAGACACAGATTCATTCATCTGTTTCCCAG
TAACCTGATCTCTTAGCTCCTTCATCGCCTTGTCTCTCTTCTCCCCCATCCTCTGCAGCTTTCTTGTCTGGCTACGAGCTTCTTGCAGACAAAA
CTCCATCTTCAGCACCTTCTTCCTCAACTCTTTATCTGTTCTTCTTTGCTTCTCCAACTGAGATTCAAGCTCCTTGGCCTTGAGTTTCCAGTGA
CCTGACATTAACCTTATCTCATCTTTCAGTTTTGCAATCTCTTCGTCTTTTGCACCCAACAGCATGTTCACTCTCTCCAAGTTCTTTGGAGAAA
CCTCTTCCACAAGTCTCCTTAGCTCGCATTCCGTGTCTTTCCCTGACTTCGCAATCTCACGCTCGATTCTCGTGACCTCGTCCCTCAGCTGCTT
CTGAGAACACTCTCTCGTCTTTAGATCTCTCTGAAGATTATCAAGCTGGTGGCCTAGCTGAGTCACACGGTCTTCGTGCTCTCGTAGCAAACAT
GTTTTATCGTCGAGTTGTTCTGAAAGCATTGTGCACTGGAGCTGTGCGGATTGAGCAGAAGCAGAGCTTGTTTCTGCCAGTTCCTTTGTCAAAG
CTAGCTGAGATCTCAGGTCGTCTACTTCTTCCAGAAACTTTGTAGCAGCAGATGTTGAAGCTTCGAGCTGACAATTCCTATCTTCCAATGTCTT
CTGCAATTTACAGATCTCCCTTTCCATGTTCTTAGCTTTTGTCTCTGCTTCTTTTCTAGAGAGGCTTTCTTTAGCAAAGAATTGTTCTTGAGAA
ACCAAACGGCCTTTCACTTGCTTAAGCTCAGCCGCCATAGACACCACGTTGCGCCTGAAACTCTCTTTCTTCCCATCTAAATCTCTCAGAAGCG
GATCCACCGCCTTTTTGGAGGAATCAGACATCAGGGTCTTGTCGGATCTCTCATAAAAATCAGTGAATGAGTTCTTGTGGAAACTAAAGAAGAT
GGAGAGAGAGAGAGAGTTCAGCAGGAGAGCTTTGTTTTCGAAATCGTCCC |
Primers for UN03945 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGACATCAGGGTCTTGTCGG |
60.112 |
20 |
GGGACGATTTCGAAAACAAA |
59.916 |
20 |
119 |
1154 |
1272 |
| 2 |
AACGGCCTTTCACTTGCTTA |
59.883 |
20 |
GGGACGATTTCGAAAACAAA |
59.916 |
20 |
234 |
1039 |
1272 |
| 3 |
CTTAAGCTCAGCCGCCATAG |
60.131 |
20 |
GGGACGATTTCGAAAACAAA |
59.916 |
20 |
218 |
1055 |
1272 |
|
|
