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Simple sequence repeat (SSR)
>UN43131
GGACAGGGGGGCAAACCAGATTAAACCAAACCAGAAATCTGGAGAATCCTTCCTTCCTTCTTCCCCCAAAAAGAGAGAGAGAGTTTTGCGAATC
AGGCGAAAGTAGAAGAATAAAGGGAGAAACGAATAAGATCGGATCGGGATAGATGGCGAATCTGTATGTGAAAGCGGCACCGCCGCCGGACATG
AACAGGAACACGGAGTGGTTCATGTATCCAGGGGTGTGGACGACTTATATACTAATCCTCTTCTTCGGGTGGCTCGTTGTTCTCTCCCTCTCTG
GCTGTTCCCCTGGAATGGCTTGGACTGTTGTTAATCTCGCTCACTTCGTTGTAACGTATCACTCCTTTCACTGGATGAAAGGAACTCCTTTTGC
AGACGACCAAGGTGTCTACAATGCTCTCACCTGGTGGGAACAGATGGGCAATGGTCAGCAACTTACCCGCAACCGCAAGTTCCTTACCGTTGTT
CCTGTCGTCCTGTACTTGATAGCATCACATACAACAGATTACAGACATCCATGGCTATTCCTCAACACACTCGCTGTGATGGTTCTAGTTGTGG
CCAAGTTCCCTAACATGCACAAGGTACGCATCTTCGGGATCAACGGTGATAAGTAAGGCTTCTTTAGCATACTCAGATCCATTTCTTTTTATGG
CAACAGAAAAAGTGGATATGAAGCAAAACATATTTGTATAAAATGTGATATGAGTTGG |
Primers for UN43131 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGGCAAACCAGATTAAACCA |
59.801 |
20 |
ACCACTCCGTGTTCCTGTTC |
60.009 |
20 |
199 |
9 |
207 |
| 2 |
GGGCAAACCAGATTAAACCA |
59.801 |
20 |
GAACCACTCCGTGTTCCTGT |
60.009 |
20 |
201 |
9 |
209 |
| 3 |
GGGCAAACCAGATTAAACCA |
59.801 |
20 |
GTGCCGCTTTCACATACAGA |
59.871 |
20 |
166 |
9 |
174 |
|
|
