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Simple sequence repeat (SSR)
>UN43165
GGGGGCTCTCTCACCGATCTCTGCGTGAATGATGGTGGTCCAACTATGGGAGACCCTCAAGGAAACCATTACAGCTTACACTGGACTTTCTCCC
GCCGCGTTTTTCACCGTCTTAGCCCTCGCTTTCGCCGTCTACCAAGTCGTCTCCGGTTTCTTCGCCTCTCCCGAGGAACACCGCCCGCGTTCCA
CGGAGGTACACCCGCCTCCTCCGCCGCCGGTTCAGCTCGGAGAAATCACTGAGGAGGAGCTTAAGCAGTACGACGGCTCCGATTCCGAAAAGCC
CCTCCTCATGGCGATCAAAGGCCAGATCTACGATGTTTCCCAGAGCAGGGTGTTCTATGGACCAGGTGGACCATACGCTTTGTTTGCGGGGAAA
GATGCGAGCCGAGCTTTGGCGAAGATGTCCTTTGAGGAGAATGATTTGACCGGAGACATCTCGGGTCTCGGTCCTTTTGAGCTAGATGCGTTGC
AAGACTGGGAATACAAGTTCATGAGCAAGTATGTCAAAGTCGGGACCATTCTGAAGAAGGATGGACAAGGCGGAGAAAGTAAAGAGGAACCTTC
TACGAACACTACTGGAGAAGAAGCTTCCGTTGGCGGCGAAGCTTCGACAAGCGTAGAGGAGGGAACTGCAGAAGCCATCGAGAAGAAGGATGTC
GCAAATGGTGATGCTGCAAAGGAAGATTAGTGAGAGACTTTTAAGGGGTTTTAAGTTATATATATATATAGCTCAATGTGGAAGAAGGCAGCTC
AATAAATGAAAAAAAGAAATGTAGACTGTGTGTACTTTTTGGATCTTTTATTTTACATCTAATTCTGGTT |
Primers for UN43165 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGAAGGATGTCGCAAATGG |
60.074 |
20 |
ATTGAGCTGCCTTCTTCCAC |
59.434 |
20 |
109 |
647 |
755 |
2 |
AGCTTCGACAAGCGTAGAGG |
59.78 |
20 |
GAGCTGCCTTCTTCCACATT |
59.434 |
20 |
149 |
604 |
752 |
3 |
AGCTTCGACAAGCGTAGAGG |
59.78 |
20 |
ATTGAGCTGCCTTCTTCCAC |
59.434 |
20 |
152 |
604 |
755 |
|
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