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Simple sequence repeat (SSR)
>UN03949
TTTTTCGTTTATAGTCAATATCTTTCACATTTCCATACAAACATATTCAAACTCATTATTTCATACGCCAACCACCATTGTAATATTTTTGTGT
ATAATAGATATGATGTATATGAAGATTATCTTCAAAACATGTTCAAGGACATTTGGGATGGAGAGAGAGAGAGAGTATGAAATGGCAGTGGGAT
GAAATTAAAGATGGGAGGGTAAGACTAACATGATAAAGCCAATAACAGTCATCCAAGAAGAATCTGATGTATCCCAGTCTGGAGCAAGAGTAGC
CCAAATGACAAGGTACAGAGCTTGGGCAACAAGTACTGCAAAAGAAAAGATGAAAATGGGCCATAATAGCAAATGTCTCCTCTGAAAACGGTAT
CCAATTTCAGGGGCAATATAGTGAAGGAGGAGAAAAGCTATCAAATCAAAGAATGAGATGACACTCCAGTTAATAAGTGCAGCTGCGAGAAGTA
GCGAAGGCAAGAGGAAGCCGATGAGAAAACTCGACCATGTCCCAATTCCCATCGAATCAAATAGATCCAACTTTGCTTTTTCCCCCGCCCGCCG
AGGACGACGACGAGGACGACGACGAGGTGGATGAGGAGAAGAAGATATCAAAAAAGGTATTACTGGGATTTGGGATTTGGAATATGGAAATCCG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAATACGCTAAACCAATCTAGAACCGTCCC |
Primers for UN03949 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TACGCCAACCACCATTGTAA |
59.849 |
20 |
ACTTGTTGCCCAAGCTCTGT |
59.914 |
20 |
253 |
64 |
316 |
| 2 |
TACGCCAACCACCATTGTAA |
59.849 |
20 |
TTGCCCAAGCTCTGTACCTT |
59.875 |
20 |
248 |
64 |
311 |
| 3 |
TACGCCAACCACCATTGTAA |
59.849 |
20 |
TTTGCAGTACTTGTTGCCCA |
60.293 |
20 |
261 |
64 |
324 |
|
|
