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Simple sequence repeat (SSR)
>UN43224
GGGAATCGCTCGATCTCTCCTTCCTTCCACCATTATTTTTGTTTGTTTGTTTGTTGGGGGTTTATAGATCGGAAGGTCGTAGTTAGGGTTTAGC
AGAGATGAGCCGAAGTCTGGGAATACCGGTGAAGCTTCTCCACGAGGCGTCGGGTCATATAGTGACGGTAGAGCTAAAGAGCGGAGAGCTCTAC
AGAGGAAGCATGATCGAGTGTGAGGATAACTGGAACTGCCAGCTCGAGGACATTACCTTTACCGCTCAGGATGGTAAGATATCGCAGCTTGAGC
ATGTCTTCATTCGTGGCAGCAAAGTCAGGTTTATGGTCATACCAGACATTCTCAAGCATGCTCCAATGTTCAAGCGCTTAGATGCTAGAATCAA
GGGAAAGAGCGGATCACTTGGTGTTGGCAGAGGTAGAGCTGCAATGCGAGGAAAACCTCCGGCTACTGGGCGTGGAACTGGAGGAAGGGGAGCA
GCACCACCTGTGAGGAGATGATTGAATCTATGCTTAACATGTAAGCTTCTATCTGCAAACAACGCCAGCGTTTCTTACGTTTGTTGTGTATTGC
TTTAAAGTTCACTTGTAGAAACCAAATGTCCTTTTCTAACAAGGAGGCAAACAAGAAAGAGAGAGAGAGATGTCCAGATGCACACTTTTAGTTA
TGTATTTTGAGATGCCAAGATGTTGAAACATCGACGAGTT |
Primers for UN43224 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGCACCACCTGTGAGGAGAT |
59.713 |
20 |
TCAACATCTTGGCATCTCAAA |
59.262 |
21 |
215 |
470 |
684 |
2 |
GAGGAAAACCTCCGGCTACT |
59.713 |
20 |
TCAACATCTTGGCATCTCAAA |
59.262 |
21 |
261 |
424 |
684 |
3 |
GAGGAAAACCTCCGGCTACT |
59.713 |
20 |
TTTCAACATCTTGGCATCTCA |
59.262 |
21 |
263 |
424 |
686 |
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