 |
Simple sequence repeat (SSR)
>UN03949
TTTTTCGTTTATAGTCAATATCTTTCACATTTCCATACAAACATATTCAAACTCATTATTTCATACGCCAACCACCATTGTAATATTTTTGTGT
ATAATAGATATGATGTATATGAAGATTATCTTCAAAACATGTTCAAGGACATTTGGGATGGAGAGAGAGAGAGAGTATGAAATGGCAGTGGGAT
GAAATTAAAGATGGGAGGGTAAGACTAACATGATAAAGCCAATAACAGTCATCCAAGAAGAATCTGATGTATCCCAGTCTGGAGCAAGAGTAGC
CCAAATGACAAGGTACAGAGCTTGGGCAACAAGTACTGCAAAAGAAAAGATGAAAATGGGCCATAATAGCAAATGTCTCCTCTGAAAACGGTAT
CCAATTTCAGGGGCAATATAGTGAAGGAGGAGAAAAGCTATCAAATCAAAGAATGAGATGACACTCCAGTTAATAAGTGCAGCTGCGAGAAGTA
GCGAAGGCAAGAGGAAGCCGATGAGAAAACTCGACCATGTCCCAATTCCCATCGAATCAAATAGATCCAACTTTGCTTTTTCCCCCGCCCGCCG
AGGACGACGACGAGGACGACGACGAGGTGGATGAGGAGAAGAAGATATCAAAAAAGGTATTACTGGGATTTGGGATTTGGAATATGGAAATCCG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAATACGCTAAACCAATCTAGAACCGTCCC |
Primers for UN03949 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAAGCCGATGAGAAAACTCG |
59.955 |
20 |
GGGACGGTTCTAGATTGGTTT |
59.339 |
21 |
232 |
484 |
715 |
| 2 |
AGCTGCGAGAAGTAGCGAAG |
60.059 |
20 |
GGGACGGTTCTAGATTGGTTT |
59.339 |
21 |
259 |
457 |
715 |
| 3 |
GACGAGGTGGATGAGGAGAA |
60.199 |
20 |
GGGACGGTTCTAGATTGGTTT |
59.339 |
21 |
131 |
585 |
715 |
|
|
