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Simple sequence repeat (SSR)
>UN43285
GCAAAGCCAAATCCAAATACAACCACCATTTACAAGGATGATTGAAGAAGCAACTAGTGAAGGAAGCAAGAGAACATACAGAAGAATCATAAAA
CAGAGAAATGAGACAAGTTAAAAACACCTGTGGTCTCTAAATTGAAACTTGAAACCAGTTTTACAGAATGTAAAAAAACAATGAATGGTCAAGG
GAGAGCAAAAGAATAAGGTTTTTATCGACAAAGGCAGAGCTTCACATGGTGCTGCTGCTTTCACTGACAGTATCAGACCTACCAAAGTTCGAAC
CTCTGCCACAGCTGCTAATGTCAAGCCCCTGTAACCTGCCAAGATGATCTTCATGCATCGCCTCTGCAAAGGAATGAGATTGACCAGAGGCGTT
AGAAGTAGCGTGGTGCATAAGCTGAGGGTTCTGGTTCTGGTTGTGGTTGTTGTTGTTAGGCTGGAAGAGATGAAACTGATGAGTCATTTGTTGT
ATGTTTTGAGCATCAGTTTGTTGTTGTTGTTGCTGATGATGATGTTGAAAGAAGGATTGTTGTTGTTGTTGTTGTTGTTGCTGCTGTTGTTGAG
AGTATTGCATGTGTGCCATCCCGAGGTTATAAGCATCAGCGTGTGAGACTTCTCCCGTGGCGAATTTGAGCCTCTCTACTTCCTTTTTCAGCTG
GTCGTTGAGTGCGTCTCGCAACTTGGCTTGTTGTTCCATGACTTGTAAACGAAGCTTGAGCTCTGTGTTCTCAGATGACAAACCAGTTGTGTCT
CTCTGGAACAAAGACAGTTGTGCAGAGAGGGTAGTAGCTTCGGTTTGCAATGACTGGACTTTCCTCTCGAGCTCCATTATATAGCGAACCTTTC
TCTCTTTTGAACGAGCAGCAGATTGTCGGTTAGCCAC |
Primers for UN43285 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GTGGTGCATAAGCTGAGGGT |
60.142 |
20 |
CGACCAGCTGAAAAAGGAAG |
59.986 |
20 |
277 |
386 |
662 |
2 |
GCATAAGCTGAGGGTTCTGG |
59.836 |
20 |
CGACCAGCTGAAAAAGGAAG |
59.986 |
20 |
272 |
391 |
662 |
3 |
GCATAAGCTGAGGGTTCTGG |
59.836 |
20 |
CACTCAACGACCAGCTGAAA |
60.025 |
20 |
279 |
391 |
669 |
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