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Simple sequence repeat (SSR)
>UN43331
AGCCATAAAACTTAAGACCATTCATAGTTTCATCATAGACATTACTAAAGCTAAAACATTCCCAAGAACAAACACAAACCCTGTCGGATTCAGT
CAAAACACTAAACAAGATTCCAATACACAAACTAGCTTTATCATACAAAAAACTTCAAACACTGACACCTTCACACTTCATCATCATCCATCAG
ACGTGGTTGTTGTTGTTGTTGTAAGCCACAGAGACCAAGTAAGGAACTTTACCATCATCAAACGGCAAACTCACATACTCTCTCGCAAACTCCT
CAGCAATCTCCCAAGCAAGCTCTCCGCGAACCGCTTTACAGTACATATACATCACGGTCGTCGACCACGTAGTACAACATCAAAACCGTTAGAA
CAGCAGACGTCACCACGATCTGGACCACCACGAAGAAGGCACTCGTCCACAGCTTCCCATCATCCATCTGAGCCGAAGCCACGGCGCTGACCCA
GACGAAACACGCCTGTGCCACGGCGAAGACGAGGATCATCGACAGAGAAACGCTCTCCATCCCTTTGATTAGGGTTCTGCTTCTCTTCAACGGC
GTTAGCCCCCAAGAAGACTCCACCACGACCACGGCCCAGGAGAGGATCCAGTTCACGTAGAATTTGACTACGATCGCGAGGGAGATGAATATGA
CAGCTGGCGAGGTTTGATTGAGTGAGATTC |
Primers for UN43331 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAAACCCTGTCGGATTCAGT |
59.966 |
20 |
CTTGGGAGATTGCTGAGGAG |
59.943 |
20 |
223 |
75 |
297 |
| 2 |
ACAAACCCTGTCGGATTCAG |
59.966 |
20 |
CTTGGGAGATTGCTGAGGAG |
59.943 |
20 |
224 |
74 |
297 |
| 3 |
CAAACCCTGTCGGATTCAGT |
59.966 |
20 |
TTGCCGTTTGATGATGGTAA |
59.93 |
20 |
182 |
75 |
256 |
|
|
