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Simple sequence repeat (SSR)
>UN43342
AGTCTCGTCTCGGTCACACAAATAACAAAAAAGAAAACACATTACAACAACTTTTATCCAGAGATGCAAATGTCAGAATTTCAGACCAAACAAC
AAACTGAAGAAGCATAAAAAAACAGAGCACCAACCTAAATAAAGATGATTACTAAAGTAACCAAATACCTCTCTTCTGTTCGGATATTACACAA
AAGGCTACAAGCTACCATAAATATCACTGTTGTTGAAGAAGGCGTCTTCTGAGAAATTATGAGATAGTTCTGCGATTGATATATCTTCTGGCAA
ATGATGATGATTATTGTTGTTTGACACTGCTTTGAAACTGTTATTGCGGCTTGGAACTCGACCTCCTCCTCCTCCTCCTCCTGAGATGCTGGAA
GTGGAAGCAGTTGGGTTTCTCTCTGCGTTACTGTTGCCACCACCACTCTGACCTGAAAACGCTTGTTGCTGTTGTTGCAAGCTTGGTCCGTTTT
CAGATATCTCCTGTAACAGCTGATTAAGCATCTGCTGCTCCTGGTTGTTGTTGCCATGTGAATGTGGTGGTTGCAAATGATGAGGATGATTATG
CTGAAGCGTGTTGGGAGGTGGTCCATTCATGGTGCGCTGCTGCTGCTGTTGCTGCTGTTGCTGCTGTTGCTGTTGCATTTGTGGAGAGCTGGGG
AATCCAACTGTTGATAAGTTCTGCCTCTGATGGGAGGAAGAAGATGGACTCTGGGTTGGGTTCTGACTAGAGAAACCCTCTTGTTTGACCACCG
TAGTTGAGTTTGGGTTATTCATAGCGTTTTGTCTCATAAGCATGCTTTGGTAGTTGGTCAGAGCTGCTGCAGCTTGAGCCGAGCCATTCATAGC
TCCACGACCAACAAGTTGATGGTCC |
Primers for UN43342 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAACTGTTATTGCGGCTTGG |
60.131 |
20 |
AGCAACAAGCGTTTTCAGGT |
59.92 |
20 |
130 |
317 |
446 |
2 |
AAACTGTTATTGCGGCTTGG |
60.131 |
20 |
CAACAAGCGTTTTCAGGTCA |
59.881 |
20 |
128 |
317 |
444 |
3 |
AAACTGTTATTGCGGCTTGG |
60.131 |
20 |
AACAACCAGGAGCAGCAGAT |
59.874 |
20 |
203 |
317 |
519 |
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