Simple sequence repeat (SSR)
>UN43411
GGACAAATGGTTGATTTGCTGTAGAGAAAGGCCATAGTCAATACTCAATGGACAACAAATACAACAAAAAAAATATAATTTGTCTTGAGCAAGA
AACAGAAGAAGTGTTTTTCATTATTGATTGCCTGAGCAAAAAGTTTTCATTGCAGACAACAAACAGAAGGAAACAAATTGTCAAGAGAGAGAGA
GAGAGAGAGAGAGACGTTACAACATCCCTTTTATCCATCCATGCTTTGATCAAAAGCCTCAAACTTGAGGTGCGTCTGACCGCAAAACTGGTTT
CTGGGGCTTTCCATCGGCCCATTTGGAGAGGGAGAAGTGAACCTTCTCGCGGCTCATCGATTCGGCCTTGAAGGGTTCTTTCAGACAGTTCCTG
ACCAGATTCGCGCAGATGTTTGAGTACGTTATATACGTCATCCCCGCCGCTCTCCAGAACGGAACCGCCGCAGTCGATGCCATTCTCTGATTCT
TTTGATCGATTGATCGAGACGACGAGACGAGACGAGACGAGACGAGATTGAGAAGATGAAGATCGAAAGCTATCTCAGAGCAGATTCC |
Primers for UN43411 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTATATACGTCATCCCCGCC |
59.643 |
20 |
TCTGCTCTGAGATAGCTTTCGAT |
59.781 |
23 |
150 |
405 |
554 |
| 2 |
TTCGCGCAGATGTTTGAGTA |
60.545 |
20 |
TCTGCTCTGAGATAGCTTTCGAT |
59.781 |
23 |
172 |
383 |
554 |
| 3 |
TGGAGAGGGAGAAGTGAACC |
59.228 |
20 |
TCTGCTCTGAGATAGCTTTCGAT |
59.781 |
23 |
249 |
306 |
554 |
|
|
