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Simple sequence repeat (SSR)
>UN03973
GGGTTCACACTCTGCTCTCTGTTTATGTTTATGGAAGTGGCCAAATACAAATAGAAAGAAACAATAATTCTACTTACCCAAGTAGGAAATAAAA
TTAGAGAATATGATGATGATGATGACAAAAGCTTCAAAATAAAATACGTTTTGTTTATGAGACGGGGAGCTACAGATTTATATATAGCTCTCTG
AATCATTGCAACTAAACTCTACTCGAGACACCAAGCCCTCCATTATTGCCAGGTCGGATCAATGACGCAGTACGGTCTCAGTAAGATCTGTTAG
GATCCTTTAATCCAAACCCACCGAAGCTGCTCCTTCCACTTGACTGTGAAGAACGGTCTGAACCAAATCCACCAAAACCTCCTGATGAACGGTT
GTTTGAACCTCCTGAACCAAAGCCCCCACCGTAACTGGAAGAACGGTCTGAACCACCGGAATAACGGCTTTCTGAACGATCACCACCATATCTA
CCACTACCACCACCACCACCGTAACCACCTGAACGACCGCCATAGCTTGAACTGCGATCCCTCATGCCTCCTCCATAGGATCCACCTGATCGAC
CACCGCCTATTCCTTCAAACATGCTTCCGCTTCCACGTTCCACAGGAATGCTAGGAAGCTCAGTGAATTTGCTTCCAACTTCTCTCTCAATCAT
TTTAACAGCTCTTGATTGCTCCGGACCGTGGATGAGAATCGCATTTCCTTTCTTTCCAGCACGGCCCGTTCTCCCCGTTCGGTGAACAAACGTC
TCAGTGTTATTAGGAAGCTCATAATGAATCACCAAAT |
Primers for UN03973 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACGGTTGTTTGAACCTCCTG |
60.005 |
20 |
ATTCCTGTGGAACGTGGAAG |
59.966 |
20 |
243 |
371 |
613 |
2 |
CCTCCTGATGAACGGTTGTT |
59.966 |
20 |
AGGGATCGCAGTTCAAGCTA |
59.978 |
20 |
173 |
360 |
532 |
3 |
AACCTCCTGATGAACGGTTG |
59.966 |
20 |
AGGGATCGCAGTTCAAGCTA |
59.978 |
20 |
175 |
358 |
532 |
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