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Simple sequence repeat (SSR)
>UN43488
ATTTTAACACTAAACGAATCTCATTCTCATGGGGAGAAAGAATAATATAAAGCAGAGAAAAAAAATCTAAACAGAGTCTACTGGTAAAATCAGA
GGCAGAGCAAAACAATTGGTAATCCAACAAATCCCAAAACTCCAATTCGTCTGGTCAAAGAATTAGCAGAACCGGTCGCAGGGGGAACAGCTGG
AGCTCCCAAAAGAGCATGAGAAGAAGGTGCGGGAGAAGGAGCTGAGCCGGTGAAGAAACCACCGGTGTGGCCACCACCACGAGAGGAGGACATG
ACAACAATGTGAAGCTTCTCGCCTTCCACACAGTTGCTTTTGGTGCCGCTGATGAAGAAGAAAGGACCAGATCTATCTAGCTTCACCTTGGTGT
CTCCATTGCTGTAATTGGCTGCTGGGTTTGTGGTGTTGCAATTAATGTAGGCTTCTTTAGTCACTTGCAGAACCGAGTCTTTTTCCCCGTCGTA
CTTCCACACAAGAGAATCGCCGACGTGAAACCGCAAACTCTCAGCCCATTTGTTGAGGGAATCAGAAGGTGAAGAAGGGATTTTCCAGGCGCTG
GGTTTGCCCCCGACCAGAATCTCTTTGCAACATGCGAGATCAGCCAAGAAGAAGAAGAAGAAGAAGAATAACAGACAGGAAGTGGGAACTAGAG
TTGTCCGAGCCATGAGAGTTTAAGTTGTGTAGAAAAGATGAGGCTTGTGTGGCTTAACTGCTTAAGTGAGATCTGTTGTCC |
Primers for UN43488 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAAGAAGGGATTTTCCAGGC |
60.017 |
20 |
AAGCCACACAAGCCTCATCT |
59.874 |
20 |
173 |
541 |
713 |
2 |
GAAGAAGGGATTTTCCAGGC |
60.017 |
20 |
GCCACACAAGCCTCATCTTT |
60.263 |
20 |
171 |
541 |
711 |
3 |
GAAGAAGGGATTTTCCAGGC |
60.017 |
20 |
ACTCTCATGGCTCGGACAAC |
60.269 |
20 |
137 |
541 |
677 |
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