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Simple sequence repeat (SSR)
>UN43575
ATCACAACTCATAATATATATAGATAGACACAAGTGAAAAGTGTTTTACATGTAGCCACAACACCAGATCATATAAAGGTAAGTCTCAACACCA
AATTGAAAAGCGAAAACATAATTAGAAGATGATAATAGTCTTATGCCAAACACACACAATAAAAGACAAGCTTCCACATCATTAGGACAATTTC
TCAGTCATTCCTCCTTTTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTT
CTCTCCATCAACCTCCTCGACAACAGCGACTCCACCAGCAGCATTGAGCTTCGCTGCAAGGTCTTCAGCTTCTTCCTTTGTGATATATTGTTTA
ACAATGGAAGGGACATTTTCAGCAATCTCATAACTATCGCCCATGTAAAACTGGTACAATGATGTCTTGTCTTCGGTAGTTTGGGCCCATGCAA
CTTCTTTAAGCACACCATTATAATAAGGCTTTTCACACTCCATCAACTTCACAAGAAACCTCTGATCTGCTCTTCTTGGAGTTTTGGGAGGGGT
TGGAAGTCCCAACGCTTCACTAAATATAAACCTAAACTCGTGTTTTTCTTTTATAGTTAGATGTTCCAAAGTCTCAATCAGCGACAAGATTTTC
TCAGAAGGCAATGGTCTATCAAAGAGATCTATCTCCACGAGTCTAGGGAAAGGCAATTGATGTTAGGAAGAAACGACCTTTTCCAGACTTCATC
ATATTATACATATGTTCGGCTCTGTGTTGGTTGGGGGGATGAATGTCC |
Primers for UN43575 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAACACCAAATTGAAAAGCG |
59.202 |
20 |
TGTTGTCGAGGAGGTTGATG |
59.676 |
20 |
221 |
87 |
307 |
2 |
CACCAAATTGAAAAGCGAAAA |
60.095 |
21 |
TGTTGTCGAGGAGGTTGATG |
59.676 |
20 |
218 |
90 |
307 |
3 |
CCAAATTGAAAAGCGAAAACA |
60.095 |
21 |
TGTTGTCGAGGAGGTTGATG |
59.676 |
20 |
216 |
92 |
307 |
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