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Simple sequence repeat (SSR)
>UN43602
AAACACCATAAGAATTTATTTTCCCCATTATATGCAAATATTAGTTAACATTATAAATTCGACCCTATTTTTTACTTTTTTATCACAAAACACT
CTTAGATTGGTTCTTCTTGCTTCGCTCATTTCATCTTGAACTTGAAGCCTTGAGTACTGATTTAGCATAAGCTAATGGCAACGCTGCAATTTTC
TTGGCTTTCCCTACATAAGCTCTCTTTGTAAAGTTGTTGTAATCATTCGCTTCAATCTCGTCCAATATCCTCCTGTACAATAGGAGCGATGCCC
ATACGGGCCATCTGCTAGCTGCGTCAAGCTCGGTAACACCTTTCTCAGCTTCATCAAAGAACATTCTTGCTCGCTTGAGCTGCATTTTCATGAA
GTTTCTCCATTTATCAGTGAATTTTCCAGCGAATATGTCTTCATCCGAGATAAAAAGTTTTAGCATATTCAGCACAAACTTCACCGCAACGATC
ATAAGCTTCACCCAACAAACTCAAACTCCCAGTCCCTGTACCAGGGAGAACGATATCCTGTGGTTTCTTCACATCATCATCATCAAGGTCCCTA
AGCTGTTTGTTCACCAAAGCTGCTTGTTTCAGCACAACATTGTAAACCTTCTCTTCGGATGAGAGGGTTATCTCTCCTGCAGGACTTGCTACTA
AGCTTGACGAACAACACTGCTTAATCTTCTTCTTCTGCAGCTCATCACAGAAGAAGAAGAAGAGGAAGAAGTCCCCCTACCATTGTTGACTCTC
TGATTCAGACAAGGAGAAAGAAATCTAGAAGATTCCAGAAATCTCACCAATCCACAATTGGTCATTGGGTCTGGATTAGGAGAAGAAGCTGCAA
CCCATAACACTGCTACAGAAGACATAACTCAGGTTCTTGACACACACGGAGATGGAAAAAAAATCTAACTTTTTTTTTTGTCTACTCTGTTTCT
TCACTTGGAAGAATCAAAATCCAAAAACTTTGCGGAGAAACCCAAATTTTGATAATGGATCAAACTTGTAAAGATGAATGCTTTCCCTTTGATA
ATAGACAAGTTC |
Primers for UN43602 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CACCAAAGCTGCTTGTTTCA |
60.027 |
20 |
AATCCAGACCCAATGACCAA |
60.173 |
20 |
254 |
576 |
829 |
2 |
TGTTTGTTCACCAAAGCTGC |
59.888 |
20 |
AATCCAGACCCAATGACCAA |
60.173 |
20 |
262 |
568 |
829 |
3 |
AAGCTGCTTGTTTCAGCACA |
59.788 |
20 |
AATCCAGACCCAATGACCAA |
60.173 |
20 |
249 |
581 |
829 |
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