 |
Simple sequence repeat (SSR)
>UN43820
ACCAAAAAGAAAAACTATGTTTTGCTTCTCATGTCGGGCAAGGATTAATAACTTAAAGCCGCGACAGGTAATTATTCATCAAATACAAAACACT
TCCACGACTCCCATCTAGCTATGATCTTCATATAAACTGTAATATAAAACACCATTTTGTTCAAAATACAAAACGCATTTTTATATATATCTAG
TAAAAAGAAAAAGTTGATCACCATCAAGAATATTCATCAAGAGCACATCGATCGCGCCGATTTATTTGAAGTCATCGAGAGAGATATTCTCGAC
TGAGCCAAAACCCTCGAATGATCCAACCTTGGAGTAATAATTATTAGTCCTCATCGTGAGTCCACCCAAAAAATCGAGAGGCGTATCGTTGGAG
GTTAGAGCCGTCGTGTCGTAGACGAAAGACGTGGTAGTGGATGTGGCGGTGATGTCGTCGATGATGGGATAATAGAAAGAACATTTTCCGTTGT
CGCTGTTGTAGTGATGATTATAATCTTGGATGAGAAGATCGTTAACCACAGTGTTTTCAATCTTTTTTAAGTCTGTGTAAATGTCGTCTTCTTC
AGCCTTGTTAAGTTTTCTTCTTCTTCTTCTTCTGATGCCTTTCTTGCTTGTATCACGTAATTTTTACGGTAGAGGTTTTGGTAGACCATGATGA
AGTCACCTTGCTGCAAACCATGAGCATTCACAAAGTCCCCTGTGTTTTCTAGCACGTACATTCTGCTATTGTTGTTTGGACAGTACCTGTACTT
GAAGGTCCAAACGTGAAGACCATCCAAATCTTCCATTTTTATAGGTATCCCTTCCTTGGATTCCAACGCCGGCAAGTGAGCCTCCGCAGCTTTC
TTAGGGAGTATCATTCGGCGGAGGGAACTGACGTCACTATTCTTCAGTTCCTTCTGGAAGAGAAATCTTAGTCTTCTTC |
Primers for UN43820 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCCGTTGTCGCTGTTGTAG |
59.904 |
20 |
ACAGGGGACTTTGTGAATGC |
59.973 |
20 |
240 |
462 |
701 |
| 2 |
TGTCGTCGATGATGGGATAA |
59.883 |
20 |
GCAGCAAGGTGACTTCATCA |
59.992 |
20 |
244 |
429 |
672 |
| 3 |
GAACATTTTCCGTTGTCGCT |
60.118 |
20 |
GCAGCAAGGTGACTTCATCA |
59.992 |
20 |
218 |
455 |
672 |
|
|
