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Simple sequence repeat (SSR)
>UN04008
TCTGTGAGATGTTATGTACCAAGGGAATGAAGGTAAAAGAAAAGAAAGGGTGGTCAAATTTAAGAATCTGCCAGCGCTGCAGGAAGGATGTAGA
AACTGTGGATGGGTGGAGGTGGACAGACGCCAAGGATAGAACAGACGTCTTTCTTTTCCAGAAAATTTTCGAAATCGGCAAGCATCAGTGGGCC
GTACTCGAACACCATCTTCTTGCACTTGTCCTGGTAATTGTTGAGGGACTTGCATTCCTTGAGTAGCAAGCGAATTATCTTGAGCTTAGTTTGA
GGATCCTTGAGTTTGGTGACAAGCTGGGAGACAGTATCGTGGCAAGCCTCACAGTTTCCTTGGGAAGCAAGGAATGGTTGACAGAGGTTAAGGG
TTTTGCAGATGCCGTGGGGGTTGAGAAGAGAGACTCGAGTGAAGAAAAGTTGGGTATAATGATCTACCATGGAAAGACACTGTTTTTGCAAAGG
AGGAATCTGGGAGCAGGTCATGTGGAGGGCCTCAACGAGTGCATTCTGGTTGTCGTCATTTTGGAGGTAATCAATGGCGAGGGTGAGATACTTA
TCACACAACTCACAAACTTGGTTATCATCAGCAGATGGTTGGGGAAGAGAAGCATCACAGGTGGTCAGCCCCAAGAGGAAGAGGAAGAGGAAGA
CTCCAAATTTAATAACGCCCATAATTACTGCCTGAAACTCAATACGGCGGACGGCCACAGATCTGCTGCTCCTCCTCCTCCTCTATTGATTGAT
CGATCGACCTTCGATTCGACTCCTCCTTCC |
Primers for UN04008 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACGCCCATAATTACTGCCTG |
59.982 |
20 |
GGAGGAGTCGAATCGAAGGT |
60.596 |
20 |
106 |
673 |
778 |
2 |
CAGATGGTTGGGGAAGAGAA |
60.042 |
20 |
GGAGGAGTCGAATCGAAGGT |
60.596 |
20 |
183 |
596 |
778 |
3 |
TGCATTCTGGTTGTCGTCAT |
60.12 |
20 |
GGAGGAGTCGAATCGAAGGT |
60.596 |
20 |
269 |
510 |
778 |
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