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Simple sequence repeat (SSR)
>UN43910
CGACTTTATAAGTTTCCAAAGTAACTAGAGCAAAACATTCTACACATGAAAATACGACACAAGAACAGACAATAAACACACAACAAGATAAATA
AAACGTTAACAAATAAAACAATAAAATTTATACTGTATGTTTTTATAACCCAAAGAGAAGATATTATTGCTCACTTCTCAACAGTTGATTCCAC
ATTCCAGGATGTCCGGGCCAGTGACTCTTTTAGTGAAGGGATCGATCCTAACCCACAACAGGGTAGCCTAACTCAACGGTCGCTTCATCAGCGA
AGCCATCCTCGTCTTTATCACCGGGAATAGCAGGACTCCCCTTGTGCCTCTTGTAAGTGGTTTTGCACTGAGGACAAGATTGATTCCCATCCTT
CCTCTCGAATTCATAGCAAGGCCTGCAAACCGGGAATCCACAAACATCACACGCCACAAAACGATCACCATCAACAGTCTTGCCTACATTGTCA
CTACAGATCTGGCATATCTGGCCACCACCACCACCAACGCTCTTCATCGGCTTCCCCGCGGTTTCTCCTTCGGATTCCATCGTCGTCGCTTACT
TCCGAATCGTCAGGGGAGAGTTCAAATCATGAGATCTGAAGATGAAGTGTAGTCGCGGTGTGACTCTTCAGATCTCTCTTCTGAATCTGCGATT
CTCAGAGAGTATATGTAAATGTAAGTGAGGAGGACGAATCTTAAGATGGCTTACGATATGCAAAGCTGCTACTTTGTCTCTGCTCCCC |
Primers for UN43910 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAACATCACACGCCACAAAA |
60.011 |
20 |
CCCTGACGATTCGGAAGTAA |
60.066 |
20 |
162 |
418 |
579 |
2 |
AAACATCACACGCCACAAAA |
60.011 |
20 |
TCACACCGCGACTACACTTC |
59.905 |
20 |
210 |
418 |
627 |
3 |
AAACATCACACGCCACAAAA |
60.011 |
20 |
GTAAGCGACGACGATGGAAT |
60.103 |
20 |
146 |
418 |
563 |
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