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Simple sequence repeat (SSR)
>UN43919
GGACTTGTCTGTCTCTACCTTTTCTTGTTCTTCATCACAACAAAAACAAAATCTTCTCTTTTTCTCTAAACACAAATTTATTCAAAGAATCTCA
AAGATCAACGAGATGTACAACAAATGCAGCTCTCCTTCTTCCGTCAGATCAATAAGAGGTCACAGAATGAGATCTCCGATCTGCTGTTTAGGAG
CCAACGCGGTGGTCGAGCCTGAAGCCATGATCGGATCATCAAAGACTCCCAAATCTCCTTACGAGTGGCTCAAATCAACCGCGCAGGAGCTCGA
GATCAGAGATCGCTGCCGCCGCGTCAAGACCCGCATCAAGGTCACGTGCCGCAACAACAACTGCGTTCATCCACATCATCATCATCATCATCAT
CACCAGAGCGGCCCGAGCTATCCTGTGGATTTCAGCTACGATCCTTTGAGCTACGCGCTCAATTTCGAGGACGACGTGCGAGCGTACGAGGATG
TTTCTTTCCCGAATTTCACGGCGAGGTTGCCTGCGTCTCCGGTGGCCAAAAGATCGGCGACGGTTGATCTTATCTCGTTCTAAGTTCTTCTAAC
CGTTGTTGATTGATCAGTCCCTTTGCTTTTATCATGTGACGCGCGGCGGAATATATAAATGTTCCTCTGTTGTGTGCTTTGCGTACATATACGA
CGTCGTTAATATAATTGTAAATGCTCTTTCGCATATAGATTGATGATGTGTGCAAAAAAATAAAAAATAATAAAGAAACATTTTCTG |
Primers for UN43919 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCGGATCATCAAAGACTCCC |
60.011 |
20 |
CGTGAAATTCGGGAAAGAAA |
60.046 |
20 |
272 |
219 |
490 |
2 |
ACGAGTGGCTCAAATCAACC |
60.119 |
20 |
CGTGAAATTCGGGAAAGAAA |
60.046 |
20 |
242 |
249 |
490 |
3 |
GCAACAACAACTGCGTTCAT |
59.77 |
20 |
CGTGAAATTCGGGAAAGAAA |
60.046 |
20 |
158 |
333 |
490 |
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