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Simple sequence repeat (SSR)
>UN43955
CAACATAGAAAAACCTGTTCATTCAACCATCTCACTAACTGAATACAATCCAGAAACCAAAAGATCCAAGACAGAGAATCCATTAATATATCTA
AACATGCAAATCCAGATCGAAACGCAAATTAAAAAAAAAAACGAAACCCTAAGTGCTCGTGAATTTGGTAACCGCCTTAGTCCCTTCAGAAACG
GCGTGCTTCGCGAGCTCTCCGGGCAACACGAGCCTGACCGCCGTCTGGATCTCCCTTGACGTGATCGTCGGCTTCTTGTTGTACCTCGCGAGCT
TCGAAGATTCCTGGGCGAGTTTCTCGAATATGTCGTTGATGAAACTGTTCATGATCCCCATGACTTTCCCAGAGATTCCGATGTCGGGATGGAT
CTGCTTCAGGACCTTGAAGATGTAGATCTTGTACGTCTCAACGCTCTTCTTCGACTTCTTCTTCTTCTTGTCGCTTCCTCCTTCCTTGGAGATC
TTCTTCTCCGCCTTTGGTCGCTTCTCCGCCGGGGCCTTCTCTGCTGGCTTCTTCTCCGCCGGTTTCTTCTCTGCCGCCTTGGGAGCCATTATCG
ATTGACTTTTTTTTTAAAGATTGAGAGAGAATCGAATGTTGTGTGAGTTGGGTGAATCCCT |
Primers for UN43955 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCCCAGAGATTCCGATGTC |
60.011 |
20 |
CCCAACTCACACAACATTCG |
60.001 |
20 |
269 |
348 |
616 |
| 2 |
TTCCCAGAGATTCCGATGTC |
60.011 |
20 |
GGAGAAGAAGCCAGCAGAGA |
59.827 |
20 |
180 |
348 |
527 |
| 3 |
TGACTTTCCCAGAGATTCCG |
60.187 |
20 |
CCCAACTCACACAACATTCG |
60.001 |
20 |
274 |
343 |
616 |
|
|
