Simple sequence repeat (SSR)
>UN43960
CTAAAGCAATTATGGTCTATTTTTTTATTTTATTTTTTTGAAAAAGGGCTAATTATGGTCTATTTGTTTCATAATAAACAATATTTCTGACATT
ATTTTTACGTGACAATATATGTGCCGTGACTCGAACGTTTTGTTTAAACTTACCGGAGACACCGGCGGTACAGTAAACGAGAACAAAAATCATT
CCACCGAAAGCCCACGCAATCCCCAATATTCCTACACCGCCGCAATAAACTCCTCCCGCGTTTGCGTCGGTCTGAGCTTTGTAGCCGATTACGG
TGAGGACTGAGACGTAAAGGAAGAGAAGTGTCGCCACAAACTCAGCTATGACCGCTCTGTAGAGCGACCACTTCCCAAGTTCCTCCATGTCTAA
CAAAGGCGCCGGAGGCGGATCAACGTAATCTCTCACCGCCGTTGCTCCCCTCTCTTGCACCTCCAAGTCCTTTGCCATGGCCAAAGATGATGAT
GATGATGAGAGACAGAGAGAGCAAGAGATAGATGAGTTTTAATGTTTCC |
Primers for UN43960 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGCCACAAACTCAGCTATG |
60.011 |
20 |
TCATCTATCTCTTGCTCTCTCTGTC |
58.462 |
25 |
193 |
313 |
505 |
| 2 |
CGCCACAAACTCAGCTATGA |
60.011 |
20 |
TCATCTATCTCTTGCTCTCTCTGTC |
58.462 |
25 |
192 |
314 |
505 |
| 3 |
AATAAACTCCTCCCGCGTTT |
59.966 |
20 |
TCATCTATCTCTTGCTCTCTCTGTC |
58.462 |
25 |
274 |
232 |
505 |
|
|
