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Simple sequence repeat (SSR)
>UN43997
TTTTTTAACCACAGAAGATGAATCGAGCCTTTTACAGAACTGCGGATTACATCATTACAAGAACACAAATATATATATATATATATATGGAACT
GACAAAGGTAGGATTCTGCAATAAGATCAGAGAAAGTCACAACACATAGAAGTGGCAAAAACATGACTAAAAACAAAGTGAAACATGGAGGTCA
TCAATGGCCAACGTGACCACGCCCGCCACAGCTTTTACACATAATGTTACCACTTCCACCACAACCTAAGCAACGGACTTTAACAATGATGCCT
TGGCTCTCCATAATGGAGTCAACGTAAAGACCAGTTCCAGAACAAGTGGCACAAAGCAATGCACCTTTAGCTTCGCAACAAGTGCAACGCCTGT
TATCACCAATCTCTCTCTCGATATAGATAATCCGACAGGCTCCTCGATGATCTCTTCGGGTATCGGCTTGTCGTAACAGAACATCGACTCGAGA
CTGCTTAATTGTCTGTTCACATCTCTTTTTAAACATGACTCAGCCTTGAGAGATGAAGAAGGAGGATGAGGAGAGCACACTCTTACGCGGGAAC
CGAATAATCTAGGAGAAGGAATCACGCGTCGAGTTCTTCCGCCAACAAAACTCGATTTCGCCGGAAAAGCAAAATCTAAAGCGGTATTCATCGT
CGACGAGATCGAGATTTCGAAAATCGAATAGAGAGATGAAGAAGGTTG |
Primers for UN43997 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCCTTTTACAGAACTGCGGA |
60.386 |
20 |
GAGAGCCAAGGCATCATTGT |
60.226 |
20 |
264 |
27 |
290 |
| 2 |
GCCTTTTACAGAACTGCGGA |
60.386 |
20 |
AGAGCCAAGGCATCATTGTT |
59.7 |
20 |
263 |
27 |
289 |
| 3 |
AGCCTTTTACAGAACTGCGG |
59.517 |
20 |
GAGAGCCAAGGCATCATTGT |
60.226 |
20 |
265 |
26 |
290 |
|
|
