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Simple sequence repeat (SSR)
>UN44048
CGAAAACAACAAAAATCCTCGAGGTTGAATATATTAGAAACAAACACAACACTTGTTTAGACTCTTCTACGAGATCTCCTCTTACTAAGAAGAA
CCGAAGAAGAAGAACAAGACCTGACTTGAGAAGCTAACTTAACAAAACTCTCTTTCTTGAATCCAAAAACCACACCAAAACAGAGAAACACAAA
GAACAAAGATGTAGCCTCTCTCTTCAGCTCTTTCAAAAAACTGATACCAAGCAAGCAAGCTCCTAAAACCTTCAGAACCTCATCACTCTTTATC
ACCTTCCCAGAGACTTTGCAGTAACCACAAATCCACAGCATTACACAAACGAGAATCAAAGTTGGTACTCTGTTCCGTTTCCTTCTGGGTGAAA
CAAATCTCCACCATCCTCTCCCTCCACCACCACCACCACCACGACCACCTCCTCCATCAACGCCCCCGCCTAAATCAGCAATGATGAGATCCAA
CGGCTGCGGTAGAATCCCAAGTTTAGCAGACAGTAAAGACAGAGACTTGAACAGAAATCTCGGGCTTATTCCCTGCCCGGCTCTTTTCTTCCTC
CTCCTCCTTGCAAAGAACCAAACTTTGGAACTGGGTTCGATGTTGAATCGAAGGGAGCGACACAGAGACTGGAGATATTGATGAAAGCCTCGGA
CTTTGTGGATGAATCAAATGAAACCCATTGAAATGCGAGGATAGACGAAGAGTCATCAACGCAATTTCTGTCTTCTTGTATTGTGTGTGTTCC |
Primers for UN44048 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTTCCCAGAGACTTTGCAG |
59.982 |
20 |
ATCATTGCTGATTTAGGCGG |
60.06 |
20 |
178 |
284 |
461 |
| 2 |
CCTTCCCAGAGACTTTGCAG |
59.982 |
20 |
GCCCGAGATTTCTGTTCAAG |
59.813 |
20 |
252 |
284 |
535 |
| 3 |
CCTTCCCAGAGACTTTGCAG |
59.982 |
20 |
AAGCCCGAGATTTCTGTTCA |
59.813 |
20 |
254 |
284 |
537 |
|
|
