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Simple sequence repeat (SSR)
>UN44079
GCGTCAACTCTTTTTCGTATGTCAAAATAAAACTCTTAATTTCAGTACTACAAATAAATACAACCATTACGTATTAGAGATTCCGTGATGAGAC
ATTAAACATCTAACCAACCAAACAGCCTCACACAGATCAAAACTCCATTTCCGTTTTCAGGAAGTCTTCTTAATCGATCATGTCAAAATCTTCA
AATTCATTGACACCATCAGCTGCTTCATACTCTGATTCGCCTGCACCTTCTTCATCTTTTTCCATTGCTTCATTTGGTCCTTCTCCTACTTCAT
CATCAGTGTCCTTGTCCTCATAGATCACAAGACCTGCTTCTTCTTCTTCTTCTTAATCTAAATTGTGCACAAGCAAGTCTAAGCAGCTTGAAAC
TTCTACGGCAGTGTGAAGGGTTGATGCCCGATGAGCTGATACATGGAGTTCAAAGCGAGCAAGGACGACTCTTGGGACGTAATCCCATTGGAAT
GAGTAAGTAACTAAAAACGCACCCATAGATTGTAGTATTGGTAGAGGGGAATTAAGAAGCTTGAGAACTTCTGCCGAATTCAACTTAGCAACCG
AGTTAGCAATCACCATGCAATGCCTGTCTCAGAAGAACGTTCACAGAGGCTGCGGTAGGAGGCTTAGTATCGACCGGAGCAGAATCCTTATTAC
TCTCCTCACTTGTAAGCTTCTCTCCGGCTAATCAAAGGATGAACACTCGCCGGACTGATATCCCACAACCCCACCGACGCAACAACGCATTGAA
GAACTCGTAGTGGACGTCCGAATTAATAGGAATTATCACGAAAAAACCATAACGTGTTCCGTTTCATAAATCGTGAAGAAGATCAGGAGTCACT
ATCGGCTTCGAACGCAGATGATTGTCTTCGAGACTTGAGATTCC |
Primers for UN44079 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTGACACCATCAGCTGCTTC |
59.992 |
20 |
TTACGTCCCAAGAGTCGTCC |
60.111 |
20 |
264 |
195 |
458 |
2 |
CCATTGCTTCATTTGGTCCT |
59.933 |
20 |
TTACGTCCCAAGAGTCGTCC |
60.111 |
20 |
209 |
250 |
458 |
3 |
TTGACACCATCAGCTGCTTC |
59.992 |
20 |
AACCCTTCACACTGCCGTAG |
60.171 |
20 |
204 |
195 |
398 |
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