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Simple sequence repeat (SSR)
>UN44087
ATGATCGAACTGACTCGATACAATTTTTCGTAAAACGGATACGGCAAAGATGGTCAATAAAGACGAGCAGAGTGTGATTAAGTTTACAAGACAT
GCATACCAAAGCAATCATTCTCCACATGCATACTCTCTTCATTGCAGGCCAAGTTTATTATAGATCATGTTTCTTTAGAAGGGAGAGAGAGAGA
GCTCTCTAAGCAGAGGCGTTAACGGCTTTGTTCACGAAATTATAAACATATTCTTTCCTTGCAACGCAGTAACGGATCTCTTCATCAGTGTGAA
GATGTTCCTCGAAAAAACTCTTTACTTTCTCTTCATAATTTTGAAGCTTCTCAGGGCGTACCTCACAGAAGTCCATGTAGGAGTAGCCACGAGA
CTCGCGGATCTTTTTCAACTCCTCATCGGTTTCGTAGTGATCAGCATCAAGTCTCCAGCTAAGGACTCCAAGCTCTGCAAGTTTGTCGAGAGAG
ATGAACTCTTTAGGATCCTTGTGGTGAGGAAGTCGCTGATCCTATTGGCTATCATCCATACCATGCCTGAATCACTTCTTCTCTTCCATCCTTC
ACGGCTTCACCCATCGTCGTCTTCGTTATGCGTTTGTTCCCTTCCTCGTCTCGTCAAAACCACGCGAATAGAATCC |
Primers for UN44087 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTTCGTAAAACGGATACGGC |
59.964 |
20 |
CCGTTAACGCCTCTGCTTAG |
60.032 |
20 |
188 |
26 |
213 |
2 |
AAACGGATACGGCAAAGATG |
59.96 |
20 |
CCGTTAACGCCTCTGCTTAG |
60.032 |
20 |
181 |
33 |
213 |
3 |
CTTCATTGCAGGCCAAGTTT |
60.249 |
20 |
GTGAGGTACGCCCTGAGAAG |
59.867 |
20 |
218 |
131 |
348 |
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