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Simple sequence repeat (SSR)
>UN44093
CTCTCAATATTCACTTTATAGATTCAAATGAGTATGAGAACTTTGATGAATAAAGAGAGAGAGAGATACACTGTTGAGTTTATACAAAGAATGG
ATTTAAAAAAGACAACAAAACATGATCACCATTTCCAGAAAACATTGGAACCACACTTGAACTTATCTTTGCCTTCGCATTCCAACGCCAAATC
TTCTGAGATGAATGGTACTTTCTTTTGTTTGGCAAGATCTTGGCAACCAGTGAAATTCTCAGGGAACTTACAGCTTCCGAACTGAACAGTAAAC
GCTCTCGCAAAGTTTGCTCCACTTGTTGCCAACCTCTTCTTATCATTCAGTTCTTTGTTGGCTTTGCTCTTCTCGAGGTACTCATCGATGACGC
CAGCATTAGCAGAAGCAGAGACAGCAGCAGAGGAGAAGAGTGTAGCAGCTAAGAACACCATTGCGGATCTTCTTCCATTAACATCATCACCACC
GACTCGTCGTTGAGCTGCTTTGATCACAGGAAGCGTTTGTTTCTTTTGACCAAACCCAACCGATGAATTCACTAAACCCACTTTCTGGTTCAGC
TCTGCTGAGCTACCACCAGAGATTGCGTAGCTGCATGTGAGAACAGTCGAGTTCATGGCCGCCATTTTGTTTGTTCAG |
Primers for UN44093 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCAAATGAGTATGAGAACTTTGATGA |
59.227 |
26 |
CGGAAGCTGTAAGTTCCCTG |
59.869 |
20 |
244 |
24 |
267 |
| 2 |
TCAAATGAGTATGAGAACTTTGATGA |
59.227 |
26 |
GGAATGCGAAGGCAAAGATA |
60.175 |
20 |
154 |
24 |
177 |
| 3 |
TCAAATGAGTATGAGAACTTTGATGA |
59.227 |
26 |
GAAGATTTGGCGTTGGAATG |
60.448 |
20 |
168 |
24 |
191 |
|
|
