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Simple sequence repeat (SSR)
>UN44229
GCAGTAAGCTTATAAATCTTGCTGTTCCTGGGACCATTGATGAACGAGCTATCAACACAAAGAAAATACTCAACCCATGGGAGAGGAATGAGAA
TCTTACTCTAGGTCTCAATTCTGCCAAAGCTATTGGACGCACTGTGGTCAACATTGGAACACAGGACATTGCTGAAGGAAGAGTGAGTTATACA
TTCCCAACATTGCAAGATTTATCTATTTATTTTCATGACTTTTTTTTCTCCTTTGCAGCCATATCTCGTACTTGGGTTGATATCTCAGATTATT
AAGGTACTCCTTTTCTAGGTTATAGGAATCTATTGGACTTGTTATAAGACTTACTAACTCCTCTTGTTGTTGTTGTTGTTATCAGATCCAAATG
CTGGCTGATCTCAATTTTAAGAAAACTCCTTCACTTTTCCAATTGGTGGATGACACTCAGGTAATATATATATGCAATGCTTTCTAGGAGAATA
ATGAAAATGCATTAATATCTTCATGACGTTGCAGGATGCGGAGGAGCTCATGGGATTGGCTCCTGAAAAAGTATTGCTAAAATGGATGAATTTT
CATCTCAAGAAAGCTGGTTATGAAAAGCAGGTCACCAATTTTTCTTCTGATGTCAAGGTAATTTTAACCTGCTCATATATTTCTCTTTTATTCT
ACCAAGCATTGCTCTC |
Primers for UN44229 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CACAGGACATTGCTGAAGGA |
59.831 |
20 |
TTGAGATCAGCCAGCATTTG |
59.948 |
20 |
237 |
154 |
390 |
2 |
TTTTTCTCCTTTGCAGCCAT |
59.823 |
20 |
TTGAGATCAGCCAGCATTTG |
59.948 |
20 |
160 |
231 |
390 |
3 |
CCTTTGCAGCCATATCTCGT |
60.235 |
20 |
TTGAGATCAGCCAGCATTTG |
59.948 |
20 |
153 |
238 |
390 |
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